v0.23

• Bioinformatics activity trending - new page showing number of concurrent pipeline processes over time
• Samplesheet information is now available via the endpoint lims/run_status
• Adds the ability to load data into the LIMS database from a YAML file when using a SQLite back end
• Makes the library plate view generic and adds the ability to view genotyping plates. Adds a summary table to both these views
• Adds library information to sample and project pages

v0.22

• New sequencing trending and turnaround graphs
• New library prep QC view and database queries
• Coloured project status by staleness
• New page for samples not processing
• 'gender' database keys renamed to 'sex'
• Updated EGCG-Core to v0.11

v0.21.1

• Update to schema for rapid processing and GATK4 pipelines
• Add new LIMS step in sample status definition to transition to Sample QC/Library Prep/Library Queue

v0.21

• New date filters in project/sample status endpoints
• Less misleading column names, tweaked show-hide defaults
• Pipeline data in project table
• Pipeline/genome data in sample table
• Removed run top-level autoreview
• Removed server_side and database_side aggregation
• Not showing samples as Invoicing if they're removed

0.20.2

• Removal of required_yield_q30 from automatic sample review
• GC bias storage metrics
• Empty list formatting bug fix

v0.20.1

• Fix bug in the display single sample cells in project status page

v0.20

• New Species and Genome Page describing the currently supported species and the yield values
• In Automatic Run review: compound formula now use read duplicates and 96G
• Sample finished date now points to first finished status rather than the last
• Nb samples received added back to Project status lines

v0.19.1

• Bug fix in Automatic Sample Review where yield in gb were compared with required yield in base

v0.19

• Added expected yield/coverage columns to project and plate status tables
• Added Data Release Trigger to DELIVERY status
• New review thresholds
  • Overall run: total yield, %Q30, %Q30 R1/2
  • Lane: %Q30 R1/2, adaptors and duplicates
  • Adding formula logic
• Added commit hash to dev instances
• Highlighting samples which have different usable data from processed data
• Adding usable run elements to sample aggregation
• Adding required yield and species to Lims queries

v0.18.2

• Add field for storing phix and display it on run/lane/run_elements
• Fix status definition for genotyping and finished
• Code refactor