v0.18.1

• fix project status URL bug

v0.18

• Allow multiple projects to be viewed on one page
• Show open and closed projects
• Fix bug in lane review

v0.17.1

• Fix process in progress in sample's process list
• Add other insert type in schema to record non standard insert and fix median insert size
• Fix sample status remove by adding "Request Repeat"
• Fix schema to support pipeline resume
• Add interop metrics to the lane end point

v0.17

• add tests for limsdb
• get coverage values from rest API/LIMS rather than from hardcoded values
• Use aggregated data

v0.16

• Added on-insert data aggregation via Eve database hooks
• Added a Python 3.6 build
• Removed Werkzeug server option
• Updated to Eve 0.7.4 and PyMongo 3.5.1
• Remove sample expected yield and add required yield/yieldq30/coverage
• Fix date started in sample status

v0.15.2

• Fix coloring issue that caused some rows to use the wrong threshold

v0.15.1

• Fix thresholds for Automatic review actions and coloring in the web app to match SOPs
• Add schema information to support mapping metrics in run_elements
• Fix automatic sample review (Server error)

v0.15

• Added initiation of LIMS-based run/sample review
  • modal popup to initiate review of selected rows of a datatable
  • sends a POST entry to new actions endpoint
    • starts a LIMS step and sends back the step url
• Automatic run/sample review
  • as from EGCG-Project-Management
  • applies metric-based review and pushes results directly back to the database
• Removed /runs/recentlims page
• Added cst_date to /lims/status/run_status
• Added Finish Processing to project status
• Fixed setup in Docker image entrypoint
• Added recent, current_year and year_to_date run views
• New datatable columns: coverage_5X, cst_date, mean_coverage (pointing to coverage.mean)
• New schema entries:
  • run_elements: useable_reviewer
  • projects: sample_pipeline (stores which pipeline version to use for a sample in a project)
  • samples: useable_reviewer, files_delivered.size, files_downloaded.size
  • analysis_driver_procs: pipeline_used (stores the pipeline version run on a dataset)
  • actions endpoint
  • records actions performed on the REST API
• Schema fixes:
  • fixed data type of useable_comments
• Added EGCG-Core and PyClarity-Lims as requirements

v0.14.3

• Added 2D barcode field to sample view
• Made tiles_filtered, trim_r1 and trim_r2 nullable
• Added files_delivered and files_downloaded to sample schema
• Added data_source to analysis_driver_proc schema

v0.14.2

• Add Cleaned yield/%Q30 in many pages along with colouring of row that described filtered runs