Skip to content

Update accepted paper #82

Update accepted paper

Update accepted paper #82

Workflow file for this run

name: Update accepted paper
on:
workflow_dispatch:
inputs:
repository_url:
description: 'URL of the repository containing the paper file'
required: true
branch:
description: 'Git branch where the paper Markdown file is'
required: false
issue_id:
description: 'The issue number of the submission'
required: true
jobs:
reacceptance-and-publishing:
name: ${{ format('Updating accepted paper from issue {0}', github.event.inputs.issue_id) }}
runs-on: ubuntu-latest
env:
GH_ACCESS_TOKEN: ${{ secrets.BOT_TOKEN }}
GITHUB_TOKEN: ${{ secrets.BOT_TOKEN }}
GH_REPO: openjournals/joss-reviews
ISSUE_ID: ${{ github.event.inputs.issue_id }}
DEFAULT_ERROR: ":warning: Couldn't update published paper. [An error happened](https://github.com/${{ github.repository }}/actions/runs/${{ github.run_id }}?check_suite_focus=true)."
steps:
- name: Compile Paper
id: generate-files
uses: xuanxu/paper-action@main
with:
repository_url: ${{ github.event.inputs.repository_url }}
branch: ${{ github.event.inputs.branch }}
issue_id: ${{ github.event.inputs.issue_id }}
journal: joss
compile_mode: accepted
- name: Update paper files
id: update-files
uses: xuanxu/update-files-action@main
with:
papers_repo: openjournals/joss-papers
branch_prefix: joss
issue_id: ${{ github.event.inputs.issue_id }}
pdf_path: ${{ steps.generate-files.outputs.pdf_path}}
jats_path: ${{ steps.generate-files.outputs.jats_path}}
crossref_path: ${{ steps.generate-files.outputs.crossref_path}}
- name: Validate metadata files
id: validate-xml
uses: xuanxu/validate-xml-files-action@main
with:
jats_path: ${{ steps.generate-files.outputs.jats_path}}
crossref_path: ${{ steps.generate-files.outputs.crossref_path}}
validation_mode: strict
- name: Create and Merge Pull Request
id: pull-request
uses: xuanxu/deposit-pull-request-action@main
with:
papers_repo: openjournals/joss-papers
papers_repo_main_branch: master
branch_prefix: joss
issue_id: ${{ github.event.inputs.issue_id }}
bot_token: ${{ secrets.BOT_TOKEN }}
mode: deposit
- name: Deposit with Crossref
uses: xuanxu/deposit-with-crossref-action@main
with:
crossref_filepath: ${{ steps.generate-files.outputs.crossref_path}}
crossref_username: ${{ secrets.CROSSREF_USERNAME }}
crossref_password: ${{ secrets.CROSSREF_PASSWORD }}
- name: Deposit with JOSS
id: oj-deposit
uses: xuanxu/deposit-with-openjournals-action@main
with:
journal_alias: joss
journal_secret: ${{ secrets.JOSS_SECRET }}
issue_id: ${{ github.event.inputs.issue_id }}
paper_path: ${{ steps.generate-files.outputs.paper_file_path}}
- name: Reply message
if: ${{ success() }}
run: |
gh issue comment ${{ github.event.inputs.issue_id }} --body "🌈 Paper updated!
New PDF and metadata files :point_right: ${{steps.pull-request.outputs.pr_url}}"
- name: Error message
if: ${{ failure() && env.CUSTOM_ERROR_STATUS != 'sent' }}
run: |
gh issue comment ${{ github.event.inputs.issue_id }} --body "${{ env.DEFAULT_ERROR }} ${{ env.CUSTOM_ERROR }}"