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slurm
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.gitattributes
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README.md
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mr_mash_rss.Rproj
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ukb_real_data_ot.yaml
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ukb_real_data_ot_initiator.sh
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ukb_real_data_ot_sampled.yaml
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ukb_real_data_ot_sampled_initiator.sh
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ukb_real_data_ot_sampled_snakemake_submitter.sh
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ukb_real_data_ot_snakemake_submitter.sh
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ukb_sim_blocks_shared_effects_indep_resid.yaml
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ukb_sim_equal_effects_10traits_indep_resid.yaml
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ukb_sim_equal_effects_50000causal_indep_resid.yaml
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ukb_sim_equal_effects_indep_resid.yaml
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ukb_sim_equal_effects_low_pve_indep_resid.yaml
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ukb_sim_external_LD_equal_effects_indep_resid.yaml
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ukb_sim_external_LD_initiator.sh
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ukb_sim_external_LD_snakemake_submitter.sh
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ukb_sim_initiator.sh
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ukb_sim_missing_pheno_equal_effects_indep_resid.yaml
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ukb_sim_missing_pheno_initiator.sh
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ukb_sim_snakemake_submitter.sh
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ukb_sim_trait_1_only_effects_indep_resid.yaml
ukb_sim_trait_1_only_effects_indep_resid.yaml
 
 

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DOI

This repository contains code and data resources to accompany our research paper:

Kunkel, D., Sørensen, P., Shankar, V. & Morgante, F. (2024). Improving polygenic prediction from summary data by learning patterns of effect sharing across multiple phenotypes. bioRxiv 2024.05.06.592745. https://doi.org/10.1101/2024.05.06.592745

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Investigations on the permormance of mr.mash.rss

morgantelab.github.io/mr_mash_rss_analysis

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Dec 2, 2024
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