initial github project setup

.github/workflows/release.yaml

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+name: Build and upload to PyPI
+
+on:
+  push:
+  release:
+    types:
+      - published
+
+jobs:
+  run_tests:
+    name: Run tests
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+
+      - uses: actions/setup-python@v3
+
+      - name: Install
+        run: python3 -m pip install .
+
+      - name: Run runtime pytest
+        run: pytest tests
+
+  build_sdist:
+    name: Build source distribution
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v3
+
+      - uses: actions/setup-python@v3
+
+      - name: Set version number
+        if: startsWith(github.ref, 'refs/tags/v')
+        run: echo "VERSION = \"${GITHUB_REF_NAME:1}\"" > opuscleaner/__about__.py
+
+      - name: Build sdist
+        run: pipx run build --sdist
+
+      - uses: actions/upload-artifact@v3
+        with:
+          name: sdist
+          path: dist/opuscleaner-*.tar.gz
+
+  build_wheels:
+    name: Build wheels
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v3
+
+      - uses: actions/setup-python@v3
+
+      - name: Set version number
+        if: startsWith(github.ref, 'refs/tags/v')
+        run: echo "VERSION = \"${GITHUB_REF_NAME:1}\"" > opuscleaner/__about__.py
+
+      - name: Build wheels
+        run: python -m pip wheel -w wheelhouse .
+
+      - uses: actions/upload-artifact@v3
+        with:
+          name: wheels
+          path: ./wheelhouse/opuscleaner-*.whl
+
+  upload_pypi:
+    needs: [build_wheels, build_sdist]
+    runs-on: ubuntu-latest
+    if: github.event_name == 'release' && github.event.action == 'published'
+    steps:
+      - uses: actions/download-artifact@v3
+        with:
+          name: wheels
+          path: dist
+
+      - uses: actions/download-artifact@v3
+        with:
+          name: sdist
+          path: dist
+
+      - uses: pypa/[email protected]
+        with:
+          user: __token__
+          password: ${{ secrets.PYPI_API_TOKEN }}

.github/workflows/test.yaml

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+# This workflow will install Python dependencies, run tests and lint with a single version of Python
+# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
+name: Testing (CI/CD)
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+    branches: [main]
+
+permissions:
+  contents: read
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    strategy:
+      matrix:
+        python-version: ["3.7", "3.8", "3.9", "3.10"]
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Setup Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+          cache: pip
+
+      - name: Display Python version
+        run: python -c "import sys; print(sys.version)"
+
+      - name: Install requirements
+        run: |
+          python -m pip install --upgrade pip setuptools
+          pip install pre-commit ruff pytest
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+
+      - name: Lint with pre-commit 
+        run: pre-commit run --all-files
+
+      - name: Test with pytest
+        run: pytest tests/

pyproject.toml

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+[build-system]
+requires = ["hatchling", "hatch-requirements-txt"]
+build-backend = "hatchling.build"
+
+[project]
+name = "opuspocus"
+description = "Modular NLP pipeline manager."
+readme = "README.md"
+requires-python = ">=3.7"
+license = "MIT"
+keywords = ["OPUS", "HPLT", "pipeline manager"]
+authors = [
+  { name = "Dušan Variš", email = "[email protected]" },
+]
+classifiers = [
+  "Development Status :: 3 - Alpha",
+  "Programming Language :: Python",
+  "Programming Language :: Python :: 3.7",
+  "Programming Language :: Python :: 3.8",
+  "Programming Language :: Python :: 3.9",
+  "Programming Language :: Python :: 3.10",
+  "Programming Language :: Python :: 3.11",
+  "Programming Language :: Python :: Implementation :: CPython",
+  "Programming Language :: Python :: Implementation :: PyPy",
+]
+dynamic = [
+  "version",
+  "dependencies",
+  "optional-dependencies"
+]
+
+[project.scripts]
+opuspocus = "go:main_cli"
+
+[project.urls]
+Documentation = "https://github.com/hplt-project/opuspocus#readme"
+Issues = "https://github.com/hplt-project/opuspocus/issues"
+Repository = "https://github.com/hplt-project/OpusPocus.git"
+
+[tool.hatch.version]
+path = "opuspocus/__about__.py"
+
+[tool.hatch.envs.default]
+dependencies = [
+  "pytest",
+  "pytest-cov",
+]
+[tool.hatch.envs.default.scripts]
+cov = "pytest --cov-report=term-missing --cov-config=pyproject.toml --cov=opuspocus --cov=tests {args}"
+no-cov = "cov --no-cov {args}"
+
+[[tool.hatch.envs.test.matrix]]
+python = ["37", "38", "39", "310", "311"]
+
+[tool.hatch.build]
+include = [
+  "/opuspocus",
+]
+
+[tool.hatch.metadata.hooks.requirements_txt]
+files = ["requirements.txt"]
+
+[tool.hatch.metadata.hooks.requirements_txt.optional-dependencies]
+all = ["requirements-all.txt"]
+
+[tool.coverage.run]
+branch = true
+parallel = true
+omit = [
+  "opuspocus/__about__.py",
+]
+
+[tool.coverage.report]
+exclude_lines = [
+  "no cov",
+  "if __name__ == .__main__.:",
+  "if TYPE_CHECKING:",
+]