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graik authored Aug 4, 2018
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# biskitbase
A Docker container with all biskit library requirements as well as third-party programs wrapped by biskit.
A Docker container with all biskit library requirements as well as third-party programs wrapped by biskit (but not biskit itself).

This container is the base layer used by the full biskit docker image graik/biskit. It contains all the dependencies for biskit and
many of the third-party programs for which there exist biskit wrappers. It **does not** contain biskit itself.
Expand All @@ -8,9 +8,20 @@ The project contains an empty folder `downloads`. The docker script will look in

Note: this container is optimized for running the Python 3.x version of Biskit (branch `biskit3` in the github project).

To build run:
__Setup__

```
To re-build it locally run (change the `graik/biskitbase` tag as appropriate):
```sh
git clone https://github.com/graik/biskitbase.git
cd biskitbase
docker build -t graik/biskitbase .
```

Then run the image interactively with:
```sh
docker run -it graik/biskitbase bash
```
Publish it to dockerstore with:
```sh
docker login
docker push graik/biskitbase
```

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