Merge pull request #3358 from flairNLP/fix_semantic_versioning_and_re…

…direct_to_new_doc_page Fix semantic versioning and redirect to new doc page
flairNLP · Oct 26, 2023 · b523f8d · b523f8d
2 parents b034b8c + f443490
commit b523f8d
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diff --git a/assets/redirect.html b/assets/redirect.html
@@ -3,7 +3,7 @@
   <head>
     <title>Redirecting to https://flairnlp.github.io/</title>
     <meta charset="utf-8">
-    <meta http-equiv="refresh" content="0; URL=https://flairnlp.github.io/">
+    <meta http-equiv="refresh" content="0; URL=https://flairnlp.github.io/[VERSION]/index.html">
     <link rel="canonical" href="https://flairnlp.github.io/">
   </head>
 </html>
diff --git a/flair/__init__.py b/flair/__init__.py
@@ -33,7 +33,7 @@
     device = torch.device("cpu")
 
 # global variable: version
-__version__ = "0.13"
+__version__ = "0.13.0"
 """The current version of the flair library installed."""
 
 # global variable: arrow symbol

diff --git a/flair/datasets/biomedical.py b/flair/datasets/biomedical.py
@@ -613,7 +613,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return merge_datasets([train_data, test_data])
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class JNLPBA(ColumnCorpus):
     """Original corpus of the JNLPBA shared task.
 
@@ -943,7 +943,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class MIRNA(ColumnCorpus):
     """Original miRNA corpus.
 
@@ -1545,7 +1545,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return filter_and_map_entities(dataset, {"protein": GENE_TAG})
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class CHEMDNER(ColumnCorpus):
     """Original corpus of the CHEMDNER shared task.
 
@@ -1643,7 +1643,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return all_data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class IEPA(ColumnCorpus):
     """IEPA corpus as provided by http://corpora.informatik.hu-berlin.de/.
 
@@ -1752,7 +1752,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return merge_datasets([train_data, test_data])
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class LINNEAUS(ColumnCorpus):
     """Original LINNEAUS corpus containing species annotations.
 
@@ -1851,7 +1851,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return LINNEAUS.download_and_parse_dataset(data_dir)
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class CDR(ColumnCorpus):
     """CDR corpus as provided by https://github.com/JHnlp/BioCreative-V-CDR-Corpus.
 
@@ -1959,7 +1959,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return all_data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class VARIOME(ColumnCorpus):
     """Variome corpus as provided by http://corpora.informatik.hu-berlin.de/corpora/brat2bioc/hvp_bioc.xml.zip.
 
@@ -2109,7 +2109,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return all_data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class NCBI_DISEASE(ColumnCorpus):
     """Original NCBI disease corpus containing disease annotations.
 
@@ -2356,7 +2356,7 @@ def parse_input_file(input_file: Path):
         return InternalBioNerDataset(documents=documents, entities_per_document=entities_per_document)
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class SCAI_CHEMICALS(ScaiCorpus):
     """Original SCAI chemicals corpus containing chemical annotations.
 
@@ -2384,7 +2384,7 @@ def perform_corpus_download(data_dir: Path) -> Path:
         return corpus_file
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class SCAI_DISEASE(ScaiCorpus):
     """Original SCAI disease corpus containing disease annotations.
 
@@ -2460,7 +2460,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return filter_and_map_entities(corpus, entity_mapping)
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class OSIRIS(ColumnCorpus):
     """Original OSIRIS corpus containing variation and gene annotations.
 

diff --git a/setup.py b/setup.py
@@ -6,7 +6,7 @@
 
 setup(
     name="flair",
-    version="0.13",
+    version="0.13.0",
     description="A very simple framework for state-of-the-art NLP",
     long_description=Path("README.md").read_text(encoding="utf-8"),
     long_description_content_type="text/markdown",