fix semantic versioning of deprecations

flairNLP · Oct 26, 2023 · f443490 · f443490
1 parent 20ababc
commit f443490
Showing 1 changed file with 11 additions and 11 deletions.
diff --git a/flair/datasets/biomedical.py b/flair/datasets/biomedical.py
@@ -613,7 +613,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return merge_datasets([train_data, test_data])
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class JNLPBA(ColumnCorpus):
     """Original corpus of the JNLPBA shared task.
 
@@ -943,7 +943,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class MIRNA(ColumnCorpus):
     """Original miRNA corpus.
 
@@ -1545,7 +1545,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return filter_and_map_entities(dataset, {"protein": GENE_TAG})
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class CHEMDNER(ColumnCorpus):
     """Original corpus of the CHEMDNER shared task.
 
@@ -1643,7 +1643,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return all_data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class IEPA(ColumnCorpus):
     """IEPA corpus as provided by http://corpora.informatik.hu-berlin.de/.
 
@@ -1752,7 +1752,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return merge_datasets([train_data, test_data])
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class LINNEAUS(ColumnCorpus):
     """Original LINNEAUS corpus containing species annotations.
 
@@ -1851,7 +1851,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return LINNEAUS.download_and_parse_dataset(data_dir)
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class CDR(ColumnCorpus):
     """CDR corpus as provided by https://github.com/JHnlp/BioCreative-V-CDR-Corpus.
 
@@ -1959,7 +1959,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return all_data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class VARIOME(ColumnCorpus):
     """Variome corpus as provided by http://corpora.informatik.hu-berlin.de/corpora/brat2bioc/hvp_bioc.xml.zip.
 
@@ -2109,7 +2109,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return all_data
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class NCBI_DISEASE(ColumnCorpus):
     """Original NCBI disease corpus containing disease annotations.
 
@@ -2356,7 +2356,7 @@ def parse_input_file(input_file: Path):
         return InternalBioNerDataset(documents=documents, entities_per_document=entities_per_document)
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class SCAI_CHEMICALS(ScaiCorpus):
     """Original SCAI chemicals corpus containing chemical annotations.
 
@@ -2384,7 +2384,7 @@ def perform_corpus_download(data_dir: Path) -> Path:
         return corpus_file
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class SCAI_DISEASE(ScaiCorpus):
     """Original SCAI disease corpus containing disease annotations.
 
@@ -2460,7 +2460,7 @@ def to_internal(self, data_dir: Path) -> InternalBioNerDataset:
         return filter_and_map_entities(corpus, entity_mapping)
 
 
-@deprecated(version="0.13", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
+@deprecated(version="0.13.0", reason="Please use data set implementation from BigBio instead (see BIGBIO_NER_CORPUS)")
 class OSIRIS(ColumnCorpus):
     """Original OSIRIS corpus containing variation and gene annotations.