Water uptake final.

src/mam4xx/water_uptake.hpp

@@ -68,7 +68,7 @@ constexpr Real small_value_31 = 1e-31; // (Bad Constant)
 // compute aerosol wet density
 //-----------------------------------------------------------------------
 KOKKOS_INLINE_FUNCTION
-void modal_aero_wateruptake_wetdens(
+void modal_aero_water_uptake_wetdens(
     const Real wetvol[AeroConfig::num_modes()],
     const Real wtrvol[AeroConfig::num_modes()],
     const Real drymass[AeroConfig::num_modes()],
@@ -230,7 +230,7 @@ void modal_aero_kohler(const Real rdry_in, const Real hygro, const Real rh,
 //
 //-----------------------------------------------------------------------
 KOKKOS_INLINE_FUNCTION
-void modal_aero_wateruptake_wetaer(
+void modal_aero_water_uptake_wetaer(
     Real rhcrystal[AeroConfig::num_modes()],
     Real rhdeliques[AeroConfig::num_modes()],
     Real dgncur_a[AeroConfig::num_modes()],
@@ -352,7 +352,7 @@ void get_e3sm_parameters(
 }
 
 KOKKOS_INLINE_FUNCTION
-void modal_aero_wateruptake_dryaer(
+void modal_aero_water_uptake_dryaer(
     int nspec_amode[AeroConfig::num_modes()],
     Real specdens_amode[maxd_aspectype], Real spechygro[maxd_aspectype],
     int lspectype_amode[maxd_aspectype][AeroConfig::num_modes()],
@@ -429,7 +429,102 @@ void modal_aero_wateruptake_dryaer(
   }
 }
 
+KOKKOS_INLINE_FUNCTION
+void modal_aero_water_uptake_dr_b4_wetdnes(
+    int nspec_amode[AeroConfig::num_modes()],
+    Real specdens_amode[maxd_aspectype], Real spechygro[maxd_aspectype],
+    int lspectype_amode[maxd_aspectype][AeroConfig::num_modes()],
+    Real state_q[nvars], Real temperature, Real pmid, Real cldn,
+    Real dgncur_a[AeroConfig::num_modes()],
+    Real dgncur_awet[AeroConfig::num_modes()],
+    Real wetvol[AeroConfig::num_modes()], Real wtrvol[AeroConfig::num_modes()],
+    Real drymass[AeroConfig::num_modes()],
+    Real specdens_1[AeroConfig::num_modes()]) {
+
+  //----------------------------------------------------------------------------
+  // retreive aerosol properties
+
+  Real hygro[AeroConfig::num_modes()];
+  Real naer[AeroConfig::num_modes()];
+  Real dryrad[AeroConfig::num_modes()];
+  Real dryvol[AeroConfig::num_modes()];
+  Real rhcrystal[AeroConfig::num_modes()];
+  Real rhdeliques[AeroConfig::num_modes()];
+
+  modal_aero_water_uptake_dryaer(nspec_amode, specdens_amode, spechygro,
+                                 lspectype_amode, state_q, dgncur_a, hygro,
+                                 naer, dryrad, dryvol, drymass, rhcrystal,
+                                 rhdeliques, specdens_1);
+
+  // ----------------------------------------------------------------------------
+  // estimate clear air relative humidity using cloud fraction
+  Real rh;
+  modal_aero_water_uptake_rh_clearair(temperature, pmid, state_q[0], cldn, rh);
+
+  //----------------------------------------------------------------------------
+  // compute wet aerosol properties
+
+  // compute aerosol wet radius, volume, diameter and aerosol water
+  Real wetrad[AeroConfig::num_modes()];
+  Real qaerwat[AeroConfig::num_modes()];
+  modal_aero_water_uptake_wetaer(rhcrystal, rhdeliques, dgncur_a, dryrad, hygro,
+                                 rh, naer, dryvol, wetrad, wetvol, wtrvol,
+                                 dgncur_awet, qaerwat);
+}
+
+KOKKOS_INLINE_FUNCTION
+void modal_aero_water_uptake_dr(
+    int nspec_amode[AeroConfig::num_modes()],
+    Real specdens_amode[maxd_aspectype], Real spechygro[maxd_aspectype],
+    int lspectype_amode[maxd_aspectype][AeroConfig::num_modes()],
+    Real state_q[nvars], Real temperature, Real pmid, Real cldn,
+    Real dgncur_a[AeroConfig::num_modes()],
+    Real dgncur_awet[AeroConfig::num_modes()],
+    Real wetdens[AeroConfig::num_modes()]) {
+
+  Real drymass[AeroConfig::num_modes()];
+  Real specdens_1[AeroConfig::num_modes()];
+  Real wetvol[AeroConfig::num_modes()];
+  Real wtrvol[AeroConfig::num_modes()];
+
+  modal_aero_water_uptake_dr_b4_wetdnes(nspec_amode, specdens_amode, spechygro,
+                                        lspectype_amode, state_q, temperature,
+                                        pmid, cldn, dgncur_a, dgncur_awet,
+                                        wetvol, wtrvol, drymass, specdens_1);
+
+  // compute wet aerosol density
+  modal_aero_water_uptake_wetdens(wetvol, wtrvol, drymass, specdens_1, wetdens);
+}
+
+KOKKOS_INLINE_FUNCTION
+void modal_aero_water_uptake_dr(
+    int nspec_amode[AeroConfig::num_modes()],
+    Real specdens_amode[maxd_aspectype], Real spechygro[maxd_aspectype],
+    int lspectype_amode[maxd_aspectype][AeroConfig::num_modes()],
+    Real state_q[nvars], Real temperature, Real pmid, Real cldn,
+    Real dgncur_a[AeroConfig::num_modes()],
+    Real dgncur_awet[AeroConfig::num_modes()]) {
+
+  Real drymass[AeroConfig::num_modes()];
+  Real specdens_1[AeroConfig::num_modes()];
+  Real wetvol[AeroConfig::num_modes()];
+  Real wtrvol[AeroConfig::num_modes()];
+
+  modal_aero_water_uptake_dr_b4_wetdnes(nspec_amode, specdens_amode, spechygro,
+                                        lspectype_amode, state_q, temperature,
+                                        pmid, cldn, dgncur_a, dgncur_awet,
+                                        wetvol, wtrvol, drymass, specdens_1);
+}
+
 }; // namespace water_uptake
+
+// init -- initializes the implementation with MAM4's configuration
+inline void Water_Uptake::init(const AeroConfig &aero_config,
+                               const Config &process_config) {
+
+  config_ = process_config;
+};
+
 } // namespace mam4
 
 #endif

src/validation/water_uptake/CMakeLists.txt

@@ -16,6 +16,9 @@ add_executable(water_uptake_driver
                modal_aero_water_uptake_rh_clearair.cpp
                modal_aero_water_uptake_wetaer.cpp
                modal_aero_water_uptake_dryaer.cpp
+               modal_aero_water_uptake_dr.cpp
+               modal_aero_water_uptake_dr_wetdens.cpp
+               water_uptake_wetdens.cpp
                )
 target_link_libraries(water_uptake_driver skywalker;validation;${HAERO_LIBRARIES})
 
@@ -29,13 +32,15 @@ target_link_libraries(water_uptake_driver skywalker;validation;${HAERO_LIBRARIES
 # Run the driver in several configurations to produce datasets.
 
 foreach (input
-          water_uptake_wetdens
           find_real_solution
           makoh_quartic
           modal_aero_kohler
           modal_aero_water_uptake_rh_clearair
           modal_aero_water_uptake_wetaer
           modal_aero_water_uptake_dryaer
+          modal_aero_water_uptake_dr
+          modal_aero_water_uptake_dr_wetdens
+          water_uptake_wetdens
           )
 
   # copy the baseline file into place; is the skywalker file produced by fortran code?

src/validation/water_uptake/modal_aero_water_uptake_dr.cpp

@@ -0,0 +1,54 @@
+// mam4xx: Copyright (c) 2022,
+// Battelle Memorial Institute and
+// National Technology & Engineering Solutions of Sandia, LLC (NTESS)
+// SPDX-License-Identifier: BSD-3-Clause
+
+#include <iostream>
+#include <mam4xx/aero_modes.hpp>
+#include <mam4xx/mam4.hpp>
+#include <mam4xx/water_uptake.hpp>
+#include <skywalker.hpp>
+#include <validation.hpp>
+
+using namespace skywalker;
+using namespace mam4;
+using namespace haero;
+
+void modal_aero_water_uptake_dr(Ensemble *ensemble) {
+
+  // Run the ensemble.
+  ensemble->process([=](const Input &input, Output &output) {
+    EKAT_REQUIRE_MSG(input.has_array("state_q"), "Required name: state_q");
+    EKAT_REQUIRE_MSG(input.has_array("temperature"),
+                     "Required name: temperature");
+    EKAT_REQUIRE_MSG(input.has_array("pmid"), "Required name: pmid");
+    EKAT_REQUIRE_MSG(input.has_array("cldn"), "Required name: cldn");
+    EKAT_REQUIRE_MSG(input.has_array("dgncur_a"), "Required name: dgncur_a");
+    EKAT_REQUIRE_MSG(input.has_array("dgncur_awet"),
+                     "Required name: dgncur_awet");
+    EKAT_REQUIRE_MSG(input.has_array("qaerwat"), "Required name: qaerwat");
+
+    auto temperature = input.get_array("temperature")[0];
+    auto pmid = input.get_array("pmid")[0];
+    auto cldn = input.get_array("cldn")[0];
+    auto state_q = input.get_array("state_q");
+    auto dgncur_a = input.get_array("dgncur_a");
+    auto dgncur_awet = input.get_array("dgncur_awet");
+    auto qaerwat = input.get_array("qaerwat");
+
+    int nspec_amode[AeroConfig::num_modes()];
+    int lspectype_amode[water_uptake::maxd_aspectype][AeroConfig::num_modes()];
+    Real specdens_amode[water_uptake::maxd_aspectype];
+    Real spechygro[water_uptake::maxd_aspectype];
+
+    water_uptake::get_e3sm_parameters(nspec_amode, lspectype_amode,
+                                      specdens_amode, spechygro);
+
+    water_uptake::modal_aero_water_uptake_dr(
+        nspec_amode, specdens_amode, spechygro, lspectype_amode, state_q.data(),
+        temperature, pmid, cldn, dgncur_a.data(), dgncur_awet.data());
+
+    output.set("dgncur_awet", dgncur_awet);
+    output.set("qaerwat", qaerwat);
+  });
+}

src/validation/water_uptake/modal_aero_water_uptake_dr_wetdens.cpp

@@ -0,0 +1,57 @@
+// mam4xx: Copyright (c) 2022,
+// Battelle Memorial Institute and
+// National Technology & Engineering Solutions of Sandia, LLC (NTESS)
+// SPDX-License-Identifier: BSD-3-Clause
+
+#include <iostream>
+#include <mam4xx/aero_modes.hpp>
+#include <mam4xx/mam4.hpp>
+#include <mam4xx/water_uptake.hpp>
+#include <skywalker.hpp>
+#include <validation.hpp>
+
+using namespace skywalker;
+using namespace mam4;
+using namespace haero;
+
+void modal_aero_water_uptake_dr_wetdens(Ensemble *ensemble) {
+
+  // Run the ensemble.
+  ensemble->process([=](const Input &input, Output &output) {
+    EKAT_REQUIRE_MSG(input.has_array("state_q"), "Required name: state_q");
+    EKAT_REQUIRE_MSG(input.has_array("temperature"),
+                     "Required name: temperature");
+    EKAT_REQUIRE_MSG(input.has_array("pmid"), "Required name: pmid");
+    EKAT_REQUIRE_MSG(input.has_array("cldn"), "Required name: cldn");
+    EKAT_REQUIRE_MSG(input.has_array("dgncur_a"), "Required name: dgncur_a");
+    EKAT_REQUIRE_MSG(input.has_array("dgncur_awet"),
+                     "Required name: dgncur_awet");
+    EKAT_REQUIRE_MSG(input.has_array("qaerwat"), "Required name: qaerwat");
+
+    auto temperature = input.get_array("temperature")[0];
+    auto pmid = input.get_array("pmid")[0];
+    auto cldn = input.get_array("cldn")[0];
+    auto state_q = input.get_array("state_q");
+    auto dgncur_a = input.get_array("dgncur_a");
+    auto dgncur_awet = input.get_array("dgncur_awet");
+    auto qaerwat = input.get_array("qaerwat");
+
+    int nspec_amode[AeroConfig::num_modes()];
+    int lspectype_amode[water_uptake::maxd_aspectype][AeroConfig::num_modes()];
+    Real specdens_amode[water_uptake::maxd_aspectype];
+    Real spechygro[water_uptake::maxd_aspectype];
+
+    water_uptake::get_e3sm_parameters(nspec_amode, lspectype_amode,
+                                      specdens_amode, spechygro);
+
+    std::vector<Real> wetdens(AeroConfig::num_modes(), 0.0);
+    water_uptake::modal_aero_water_uptake_dr(
+        nspec_amode, specdens_amode, spechygro, lspectype_amode, state_q.data(),
+        temperature, pmid, cldn, dgncur_a.data(), dgncur_awet.data(),
+        wetdens.data());
+
+    output.set("dgncur_awet", dgncur_awet);
+    output.set("qaerwat", qaerwat);
+    output.set("wetdens", wetdens);
+  });
+}

src/validation/water_uptake/modal_aero_water_uptake_dryaer.cpp

@@ -39,7 +39,7 @@ void modal_aero_water_uptake_dryaer(Ensemble *ensemble) {
     std::vector<Real> rhdeliques(AeroConfig::num_modes(), 0.0);
     std::vector<Real> specdens_1(AeroConfig::num_modes(), 0.0);
 
-    water_uptake::modal_aero_wateruptake_dryaer(
+    water_uptake::modal_aero_water_uptake_dryaer(
         nspec_amode, specdens_amode, spechygro, lspectype_amode, state_q.data(),
         dgncur_a.data(), hygro.data(), naer.data(), dryrad.data(),
         dryvol.data(), drymass.data(), rhcrystal.data(), rhdeliques.data(),

src/validation/water_uptake/modal_aero_water_uptake_wetaer.cpp

@@ -42,7 +42,7 @@ void modal_aero_water_uptake_wetaer(Ensemble *ensemble) {
     std::vector<Real> dgncur_awet(AeroConfig::num_modes(), 0);
     std::vector<Real> qaerwat(AeroConfig::num_modes(), 0);
 
-    water_uptake::modal_aero_wateruptake_wetaer(
+    water_uptake::modal_aero_water_uptake_wetaer(
         rhcrystal.data(), rhdeliques.data(), dgncur_a.data(), dryrad.data(),
         hygro.data(), rh.data()[0], naer.data(), dryvol.data(), wetrad.data(),
         wetvol.data(), wtrvol.data(), dgncur_awet.data(), qaerwat.data());

src/validation/water_uptake/water_uptake_driver.cpp

@@ -7,13 +7,16 @@ using namespace skywalker;
 using namespace mam4;
 
 // Parameterizations used by the drydep process.
+// void water_uptake_wetdens(Ensemble *ensemble);
 void water_uptake_wetdens(Ensemble *ensemble);
 void find_real_solution(Ensemble *ensemble);
 void makoh_quartic(Ensemble *ensemble);
 void modal_aero_kohler(Ensemble *ensemble);
 void modal_aero_water_uptake_rh_clearair(Ensemble *ensemble);
 void modal_aero_water_uptake_wetaer(Ensemble *ensemble);
 void modal_aero_water_uptake_dryaer(Ensemble *ensemble);
+void modal_aero_water_uptake_dr(Ensemble *ensemble);
+void modal_aero_water_uptake_dr_wetdens(Ensemble *ensemble);
 
 void usage() {
   std::cerr << "aging_driver: a Skywalker driver for validating the "
@@ -69,6 +72,12 @@ int main(int argc, char **argv) {
     if (func_name == "modal_aero_water_uptake_dryaer") {
       modal_aero_water_uptake_dryaer(ensemble);
     }
+    if (func_name == "modal_aero_water_uptake_dr") {
+      modal_aero_water_uptake_dr(ensemble);
+    }
+    if (func_name == "modal_aero_water_uptake_dr_wetdens") {
+      modal_aero_water_uptake_dr_wetdens(ensemble);
+    }
   } catch (std::exception &e) {
     std::cerr << argv[0] << ": Error: " << e.what() << std::endl;
   }

src/validation/water_uptake/water_uptake_wetdens.cpp

@@ -30,7 +30,7 @@ void water_uptake_wetdens(Ensemble *ensemble) {
 
     std::vector<Real> wetdens(AeroConfig::num_modes(), 0);
 
-    water_uptake::modal_aero_wateruptake_wetdens(
+    water_uptake::modal_aero_water_uptake_wetdens(
         wetvol.data(), wtrvol.data(), drymass.data(), specdens_1.data(),
         wetdens.data());