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23 Open 10 Closed
23 Open 10 Closed
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Issues list

calculate_precision_recall() fails when replicate_groups has just one member
#69 opened Dec 7, 2021 by FloHu
Add Demo of Hit@k
#68 opened Oct 15, 2021 by michaelbornholdt
@michaelbornholdt
Issues with groupby columns
#67 opened Oct 15, 2021 by michaelbornholdt
4
Add https link for cytominer-eval installation
#66 opened Oct 15, 2021 by FloHu
1
Add Precision at R to precision at k
#65 opened Oct 14, 2021 by michaelbornholdt
1
Remaining tests for the new precision recall
#64 opened Oct 14, 2021 by michaelbornholdt
precision_recall() counts within group connections twice but not between group connections
#62 opened Oct 6, 2021 by FloHu
14
Figure out why percent replicating is apparently insensitive to number of replicates question Further information is requested
#60 opened Aug 20, 2021 by shntnu
1
Upgrade to minimum pandas 1.2 and deprecate python 3.5 question Further information is requested
#56 opened May 12, 2021 by gwaybio
assert melt in enrichment enhancement New feature or request good first issue Good for newcomers
#54 opened May 11, 2021 by gwaybio
Further optimizations
#53 opened Apr 30, 2021 by michaelbornholdt
Running metric_melt several times
#51 opened Apr 23, 2021 by michaelbornholdt
3
Add option to summarize replicate z-scores from controls as medians enhancement New feature or request
#38 opened Feb 11, 2021 by gwaybio
1
8
Support multiple columns as replicate indicators enhancement New feature or request
#28 opened Jan 7, 2021 by gwaybio
2
Add reporting option to percent_strong enhancement New feature or request good first issue Good for newcomers
#24 opened Nov 19, 2020 by gwaybio
Implement Mahalanobis distance to negative controls
#23 opened Nov 9, 2020 by shntnu
Define precision and recall @ k documentation Improvements or additions to documentation
#22 opened Nov 9, 2020 by shntnu
Define percent strong documentation Improvements or additions to documentation
#21 opened Nov 9, 2020 by shntnu
9
Calculate MOA enrichment as an evaluation metric enhancement New feature or request
#17 opened Sep 29, 2020 by gwaybio
Option to not have to recalculate melted similarity matrix enhancement New feature or request good first issue Good for newcomers
#16 opened Sep 16, 2020 by gwaybio
percent_strong outputs nan when no replicates are present enhancement New feature or request good first issue Good for newcomers
#15 opened Sep 16, 2020 by gwaybio
Evaluation metrics with full vs. subset profiles
#4 opened Aug 20, 2020 by gwaybio
Add an Audit test applying to more than one group
#3 opened Oct 4, 2019 by gwaybio
2
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