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75 Open 47 Closed
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Issues list

Query generation: add descriptions to enable function calling-like behaviour
#214 opened Nov 14, 2024 by slobentanzer
Relationship generation: allow no directionality
#213 opened Nov 14, 2024 by slobentanzer
KG schemata in benchmark need to be enriched ("schema_info")
#212 opened Nov 14, 2024 by slobentanzer
Reflexion agent docs set_api_key() should include user param
#210 opened Nov 14, 2024 by slobentanzer
Docs: Features / RAG needs to update the interface of the private methods and explain that they should not usually be accessed directly
#209 opened Nov 14, 2024 by slobentanzer
Benchmark: run on new GPT 4o model, maybe 'o1' as well?
#206 opened Sep 13, 2024 by slobentanzer Improve Benchmarking
Biocypher KG rag prompt construction need query result examples
#204 opened Sep 10, 2024 by winternewt
Ubuntu 24: Python 3.12 leads to package incompatibility
#201 opened Aug 30, 2024 by slobentanzer
API calling: LLMs to parameterise Bioconductor functions using BioChatter API definitions
#191 opened Aug 1, 2024 by slobentanzer Bioconductor support chatbot
Add Bioconductor test cases to the BioChatter benchmark
#190 opened Aug 1, 2024 by slobentanzer Bioconductor support chatbot
BioChatter build pipeline (Docker Compose) to build KG(s), vector DB, and BioChatter-driven frontend prototype
#189 opened Aug 1, 2024 by slobentanzer Bioconductor support chatbot
Vector database with embeddings of select Bioconductor content
#188 opened Aug 1, 2024 by slobentanzer Bioconductor support chatbot
Bioconductor support forum knowledge graph
#187 opened Aug 1, 2024 by slobentanzer Bioconductor support chatbot
Bioconductor vignette knowledge graph
#186 opened Aug 1, 2024 by slobentanzer Bioconductor support chatbot
Build Bioconductor ecosystem meta-information knowledge graph (BiocViews)
#185 opened Aug 1, 2024 by slobentanzer Bioconductor support chatbot
Variance in benchmark results: review hooks.py once we have more data
#182 opened Jul 25, 2024 by slobentanzer Improve Benchmarking
Remove model_name param in all cases we use the conversation_factory?
#180 opened Jul 19, 2024 by slobentanzer
Benchmark: revise file deletion upon --run-all
#178 opened Jul 18, 2024 by slobentanzer Improve Benchmarking
Generalise API agent in RAG agent implementation
#177 opened Jul 17, 2024 by slobentanzer
Token usage returns are not harmonised
#171 opened Jul 2, 2024 by slobentanzer Improve user-friendliness
Consider OpenWebUI as frontend alternative
#166 opened Jun 20, 2024 by slobentanzer
Benchmark: display SD in living benchmark
#163 opened Jun 10, 2024 by slobentanzer Improve Benchmarking
Benchmark: Contrast Chinese and English queries in ChatGLM
#159 opened Jun 5, 2024 by slobentanzer
Benchmark: extend pytest_generate_tests to accept any number of test data YAML files
#155 opened May 15, 2024 by slobentanzer Improve Benchmarking
1
@slobentanzer
Optimise extraction prompts via DSPy
#154 opened May 11, 2024 by slobentanzer
4
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