Code

Map to basesections reorganized 2#427

Code

Merged

RubelMozumder merged 40 commits intomasterFAIRmat-NFDI/pynxtools:masterfrom map-to-basesections-reorganized_2FAIRmat-NFDI/pynxtools:map-to-basesections-reorganized_2Copy head branch name to clipboardSep 13, 2024

+314-44

Commits

Commits on Sep 12, 2024

• import basesections

  

  lukaspie

  authored and

  RubelMozumder

  committed
  e94b706

• initiate base section map

  

  lukaspie

  authored and

  RubelMozumder

  committed
  35b1356

• implement mapping in __to_section

  

  lukaspie

  authored and

  RubelMozumder

  committed
  b532f64

• type hinting

  

  lukaspie

  authored and

  RubelMozumder

  committed
  7bd19b3

• name testing

  

  lukaspie

  authored and

  RubelMozumder

  committed
  af715bf

• create own basesections with mapping

  

  lukaspie

  authored and

  RubelMozumder

  committed
  6fb0cd4

• dynamically create class that inherits from base section

  

  lukaspie

  authored and

  RubelMozumder

  committed
  deb79bd

• use base section mapping function

  

  lukaspie

  authored and

  RubelMozumder

  committed
  7a23859

• add base section directly

  

  lukaspie

  authored and

  RubelMozumder

  committed
  86d3840

• rename nexus to nomad.

  RubelMozumder

  committed
  76ac1aa

• rename nexus to nomad.

  RubelMozumder

  committed
  4ed032b

• harmonize collaborative work, functionality to get the correct definitions url

  

  lukaspie

  authored and

  RubelMozumder

  committed
  b1deab7

• rename file with remote definitions url

  

  lukaspie

  authored and

  RubelMozumder

  committed
  1b5e669

• add .txt to MANIFEST

  

  lukaspie

  authored and

  RubelMozumder

  committed
  de4aa07

• test for definitions url retrieval

  

  lukaspie

  authored and

  RubelMozumder

  committed
  bb378ec

• remove unneeded function

  

  lukaspie

  authored and

  RubelMozumder

  committed
  4f2efaa

• Fix error Parsing NeXus file: Error from resolve_variadic_name function.

  RubelMozumder

  committed
  3fb908e

• Test effort to fix error in parsing nexus file.

  RubelMozumder

  committed
  579795e

• revert changes to parser

  

  lukaspie

  authored and

  RubelMozumder

  committed
  7c3e024

• revert changes to parser

  

  lukaspie

  authored and

  RubelMozumder

  committed
  b850b8f

• Nomad BaseSeection implemented properly.

  RubelMozumder

  committed
  341284c

• Attempt: Add normalize function.

  RubelMozumder

  committed
  ec3a8a2

• linting fix

  

  lukaspie

  authored and

  RubelMozumder

  committed
  fd71d09

• reorganize, dont use new classes

  

  lukaspie

  authored and

  RubelMozumder

  committed
  f1ce2e8

• implement both options

  

  lukaspie

  authored and

  RubelMozumder

  committed
  49b8647

• tests in schema.py

  

  GinzburgLev

  authored and

  RubelMozumder

  committed
  fe6cb1e

• reasonable test for normalizing NXfabrication

  

  sanbrock

  authored and

  RubelMozumder

  committed
  9be00c3

• ruff formatting

  

  lukaspie

  authored and

  RubelMozumder

  committed
  a0744ae

• initial work on NXsample normalization

  

  lukaspie

  authored and

  RubelMozumder

  committed
  3f84666

• Attempt to reference NXsample.

  RubelMozumder

  committed
  6042b99

• lab_id can be populated properly, nut not sure CompositeSystemReference work or not.

  RubelMozumder

  committed
  60bd60a

• reference aadding with lev and sandor

  

  Ron Hildebrandt

  authored and

  RubelMozumder

  committed
  fe08109

• RB

  RubelMozumder

  committed
  2c03ad1

• creating Entity entries via json files

  

  sanbrock

  authored and

  RubelMozumder

  committed
  f69cad9

• create proper Entity ELN

  

  sanbrock

  authored and

  RubelMozumder

  committed
  6e1cad5

• Clean up schema.py

  RubelMozumder

  committed
  d61d387

• converting NX to BS works properly in nexus parser.

  RubelMozumder

  committed
  704bf78

• test fix.

  RubelMozumder

  committed
  620ce87

• typo and test.

  RubelMozumder

  committed
  fde8058

• automat prefix of base classes and application definition.

  RubelMozumder

  committed
  e602092