forked from spack/spack
-
Notifications
You must be signed in to change notification settings - Fork 15
MARCONI(100) Deployment
Pramod Kumbhar edited this page Oct 7, 2020
·
6 revisions
- neurodamus-hippocampus/0.4
- neuron/7.8.0c
- py-neurodamus/1.3.0
- Run a simulation
#!/bin/bash
#SBATCH --nodes=1
#SBATCH --ntasks-per-node=36
#SBATCH -A pra18_4575_0
#SBATCH --time=00:30:00
#SBATCH -p m100_usr_prod
module purge
module load profile/advanced
module load gnu/8.4.0 cuda/10.1
module load spectrum_mpi/10.3.1--binary boost/1.72.0--spectrum_mpi--10.3.1--binary
# python 3.7.8
export LD_LIBRARY_PATH=/cineca/prod/opt/compilers/python/3.7.8/none/lib:$LD_LIBRARY_PATH
module use /m100_work/Pra18_4575_0/software/07-10-2020/install/modules/tcl/linux-rhel7-power9le
module load neurodamus-hippocampus/0.4
# Run the simulation with (old) neurodamus-hoc
mpirun special -mpi -NFRAME 1000 $HOC_LIBRARY_PATH/init.hoc
# Run the simulation with (new) neurodamus-py instead
module load py-neurodamus
mpirun neurodamus BlueConfig
See README instructions in HumanBrainProject/olfactory-bulb-3d repository.