AllenInstitute · berl · Dec 5, 2024 · Oct 3, 2024 · Oct 11, 2024 · Oct 11, 2024
diff --git a/cross_seg_comp_user_guide.ipynb b/cross_seg_comp_user_guide.ipynb
diff --git a/cross_seg_comparison.py b/cross_seg_comparison.py
diff --git a/pyproject.toml b/pyproject.toml
@@ -25,7 +25,9 @@ dependencies = [
         "scanpy",
         "scipy",
         "igraph",
-        "leidenalg"
+        "leidenalg",
+        "plotly",
+        "kaleido",
     ]
 
 [project.urls]

diff --git a/requirements.txt b/requirements.txt
@@ -176,6 +176,8 @@ jupyterlab-server==2.27.3
     #   notebook
 jupyterlab-widgets==3.0.13
     # via ipywidgets
+kaleido==0.2.1
+    # via spatial_compare (setup.py)
 kiwisolver==1.4.5
     # via matplotlib
 legacy-api-wrap==1.4
@@ -280,6 +282,8 @@ pillow==10.4.0
     # via matplotlib
 platformdirs==4.2.2
     # via jupyter-core
+plotly==5.20.0
+    # via spatial_compare (setup.py)
 prometheus-client==0.20.0
     # via jupyter-server
 prompt-toolkit==3.0.47

diff --git a/segmentation_comparison_1370519421_XEN_SIS.png b/segmentation_comparison_1370519421_XEN_SIS.png
diff --git a/setup.py b/setup.py
@@ -12,9 +12,11 @@
         "scanpy",
         "scipy",
         "igraph",
-        "leidenalg"
+        "leidenalg",
+        "plotly",
+        "kaleido",
     ],
     include_package_data=True,
     version="0.2",
     python_requires=">=3.9"
-)
+)
diff --git a/spatial_compare.py b/spatial_compare.py