changed path to provided hlahd path

ylab-hi · Mar 1, 2024 · 2bddcc5 · 2bddcc5
1 parent efee4ab
commit 2bddcc5
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/rules/hlatyping.smk b/workflow/rules/hlatyping.smk
@@ -429,7 +429,7 @@ rule hlatyping_mhcII:
   threads: config['threads']
   shell:
     """
-      hlahd.sh \
+      {config["hlatyping"]["hlahd_path"]}/hlahd.sh \
           -t {threads} \
           -m 100 \
           -c 0.95 \