Update mamba github action #314
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| name: build | |
| on: [push, pull_request] | |
| jobs: | |
| build-linux: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-18.04", "ubuntu-20.04"] | |
| python-version: ["3.8", "3.9"] | |
| max-parallel: 5 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Add micromamba to system path | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-name: sstar | |
| environment-file: build-env.yml | |
| - name: Test with pytest | |
| run: | | |
| export R_LIBS=${CONDA_PREFIX}/lib/R/library | |
| micromamba run -n sstar pytest --cov=. --cov-report term-missing | |
| micromamba run -n sstar coverage xml | |
| - name: upload coverage report to codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| name: codecov-umbrella | |
| fail_ci_if_error: true | |
| env_vars: OS,PYTHON | |
| token: d257164e-ffda-43ba-b37b-f33b5dde0f34 |