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vitessce · Jun 20, 2024 · 9a1521e · 9a1521e
1 parent 7c7ac87
commit 9a1521e
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diff --git a/NAMESPACE b/NAMESPACE
@@ -5,8 +5,11 @@ export(get_sce_obj)
 export(get_seurat_obj)
 export(get_seurat_v5_obj)
 export(get_spe_obj)
+export(giotto_to_spe)
 export(obj_list)
 export(sce_to_anndata_zarr)
+export(seurat_to_sce)
+export(seurat_to_spe)
 export(spe_to_anndata_zarr)
 export(spe_to_ome_zarr)
 import(Seurat)

diff --git a/R/giotto_to_bioc.R b/R/giotto_to_bioc.R
@@ -1,3 +1,4 @@
+#' @export
 giotto_to_spe <- function(gio) {
   return(GiottoClass::giottoToSpatialExperiment(gio))
 }
diff --git a/R/seurat_to_bioc.R b/R/seurat_to_bioc.R
@@ -1,8 +1,10 @@
+#' @export
 seurat_to_sce <- function(seu) {
   sce <- Seurat::as.SingleCellExperiment(seu)
   return(sce)
 }
 
+#' @export
 seurat_to_spe <- function(seu, sample_id = NA, img_id = NA) {
   # Reference: https://github.com/drighelli/SpatialExperiment/issues/115
   sce <- seurat_to_sce(seu)