avg_predictions(by=) gets a term column #2399
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# Run CI for R using https://eddelbuettel.github.io/r-ci/ | |
name: ci | |
on: | |
push: | |
pull_request: | |
env: | |
_R_CHECK_FORCE_SUGGESTS_: "false" | |
_R_CHECK_TESTS_NLINES_: 0 | |
R_NOT_CRAN: true | |
R_GH: true | |
GITHUB_PAT: ${{ secrets.GITHUB_PAT }} | |
jobs: | |
ci: | |
strategy: | |
matrix: | |
include: | |
# - {os: macOS-latest, r: 'release'} | |
# - {os: windows-latest, r: 'release'} | |
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release', depends_only: TRUE} | |
- {os: ubuntu-latest, r: 'release'} | |
- {os: ubuntu-latest, r: 'oldrel'} | |
- {os: ubuntu-latest, r: '4.1.3'} | |
- {os: ubuntu-latest, r: '4.0.0'} | |
runs-on: ${{ matrix.os }} | |
env: | |
_R_CHECK_FORCE_SUGGESTS_: "false" | |
_R_CHECK_TESTS_NLINES_: 0 | |
R_NOT_CRAN: true | |
R_GH: true | |
GITHUB_PAT: ${{ secrets.GITHUB_PAT }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Get Script | |
run: curl -OLs https://eddelbuettel.github.io/r-ci/run.sh && chmod 0755 run.sh | |
- name: unignore tests | |
run: awk '!/tinytest/' .Rbuildignore > temp && mv temp .Rbuildignore | |
- name: cat Rbuildignore | |
run: cat .Rbuildignore | |
- name: Bootstrap | |
run: ./run.sh bootstrap | |
- name: png (for svglite) | |
run: sudo apt update -qq && sudo apt install --yes --no-install-recommends libpng-dev | |
- name: svglite from source | |
run: Rscript -e "bspm::disable();install.packages('svglite', from = 'source');bspm::enable()" | |
- name: TMB | |
run: ./run.sh install_source TMB | |
- name: glmmTMB source | |
run: ./run.sh install_source glmmTMB | |
- name: tinysnapshot dev | |
run: ./run.sh install_github vincentarelbundock/tinysnapshot | |
- name: Matrix source | |
run: ./run.sh install_source Matrix | |
- name: Dependencies | |
run: ./run.sh install_all | |
- name: Test | |
run: ./run.sh run_tests | |
# - name: Coverage | |
# if: ${{ matrix.os == 'ubuntu-latest' }} | |
# run: ./run.sh coverage |