updates post-workshop

Savio_Demo_Code_First_Half.sh

@@ -0,0 +1,36 @@
+# Logging in
+ssh [email protected]
+
+# Password = PIN + OTP
+
+# SCP to Savio, while on your local machine
+scp bayArea.csv [email protected]:~/
+scp bayArea.csv [email protected]:~/SavioDemo/newName.csv
+scp bayArea.csv [email protected]:/global/scratch/kmishra9/bayArea.csv
+
+# from Savio, while on your local machine
+scp [email protected]:~/SavioDemo/newName.csv ~/"F18 Savio Demo"/bayArea.csv
+
+# Box lftp Demo
+ssh [email protected]
+lftp ftp.box.com
+set ssl-allow true
+user [email protected]
+
+# NOT the same as your CalNet password or Savio Login Password -- you need to set this up seperately from within your Box Account Settings!
+
+lpwd # on Savio
+ls # on box
+!ls # on Savio
+cd ~/ # on box
+lcd ~/ # on savio
+put parallel-multi.R # Savio to box
+get bayAreaBox.csv # Box to Savio
+
+# to download a directory from Box to Savio
+cd ~/ # on box
+mirror SavioDemoBox ~/
+
+# Software Modules
+module list  # what's loaded?
+module avail  # what's available

intro.html

@@ -54,7 +54,7 @@ <h3 class="date">Kunal Mishra and Chris Paciorek</h3>
 <h1 id="introduction">Introduction</h1>
 <p>We'll do this mostly as a demonstration. We encourage you to login to your account and try out the various examples yourself as we go through them.</p>
 <p>Much of this material is based on the extensive Savio documention we have prepared and continue to prepare, available at <a href="http://research-it.berkeley.edu/services/high-performance-computing" class="uri">http://research-it.berkeley.edu/services/high-performance-computing</a>.</p>
-<p>The materials for this tutorial are available using git at the short URL <a href="http://bit.do/F18Savio" class="uri">http://bit.do/F18Savio</a>, the GitHub URL <a href="https://github.com/ucberkeley/savio-training-intro-2018" class="uri">https://github.com/ucberkeley/savio-training-intro-2018</a>, or simply as a <a href="https://github.com/ucberkeley/savio-training-intro-2018/archive/master.zip">zip file</a>.</p>
+<p>The materials for this tutorial are available using git at the short URL <a href="http://bit.do/F18Savio">bit.do/F18Savio</a>, the GitHub URL <a href="https://github.com/ucberkeley/savio-training-intro-2018" class="uri">https://github.com/ucberkeley/savio-training-intro-2018</a>, or simply as a <a href="https://github.com/ucberkeley/savio-training-intro-2018/archive/master.zip">zip file</a>.</p>
 <h1 id="outline">Outline</h1>
 <p>This training session will cover the following topics:</p>
 <ul>

intro.md

@@ -9,7 +9,7 @@ We'll do this mostly as a demonstration. We encourage you to login to your accou
 
 Much of this material is based on the extensive Savio documention we have prepared and continue to prepare, available at [http://research-it.berkeley.edu/services/high-performance-computing](http://research-it.berkeley.edu/services/high-performance-computing).
 
-The materials for this tutorial are available using git at the short URL [http://bit.do/F18Savio](http://bit.do/F18Savio), the  GitHub URL [https://github.com/ucberkeley/savio-training-intro-2018](https://github.com/ucberkeley/savio-training-intro-2018), or simply as a [zip file](https://github.com/ucberkeley/savio-training-intro-2018/archive/master.zip).
+The materials for this tutorial are available using git at the short URL [bit.do/F18Savio](http://bit.do/F18Savio), the  GitHub URL [https://github.com/ucberkeley/savio-training-intro-2018](https://github.com/ucberkeley/savio-training-intro-2018), or simply as a [zip file](https://github.com/ucberkeley/savio-training-intro-2018/archive/master.zip).
 
 # Outline
 

intro_slides.html

@@ -63,7 +63,7 @@ <h1 class="title">Savio introductory training: Basic usage of the Berkeley Savio
 <h1>Introduction</h1>
 <p>We'll do this mostly as a demonstration. We encourage you to login to your account and try out the various examples yourself as we go through them.</p>
 <p>Much of this material is based on the extensive Savio documention we have prepared and continue to prepare, available at <a href="http://research-it.berkeley.edu/services/high-performance-computing" class="uri">http://research-it.berkeley.edu/services/high-performance-computing</a>.</p>
-<p>The materials for this tutorial are available using git at the short URL <a href="http://bit.do/F18Savio" class="uri">http://bit.do/F18Savio</a>, the GitHub URL <a href="https://github.com/ucberkeley/savio-training-intro-2018" class="uri">https://github.com/ucberkeley/savio-training-intro-2018</a>, or simply as a <a href="https://github.com/ucberkeley/savio-training-intro-2018/archive/master.zip">zip file</a>.</p>
+<p>The materials for this tutorial are available using git at the short URL <a href="http://bit.do/F18Savio">bit.do/F18Savio</a>, the GitHub URL <a href="https://github.com/ucberkeley/savio-training-intro-2018" class="uri">https://github.com/ucberkeley/savio-training-intro-2018</a>, or simply as a <a href="https://github.com/ucberkeley/savio-training-intro-2018/archive/master.zip">zip file</a>.</p>
 </div>
 <div id="outline" class="slide section level1">
 <h1>Outline</h1>