working on updated fib vignette for new entero functions

R/anlz_enteromap.R

@@ -3,7 +3,7 @@
 #' @param fibdata data frame of Enterococcus sample data as returned by \code{\link{enterodata}} or \code{\link{anlz_fibwetdry}}
 #' @param yrsel optional numeric to filter data by year
 #' @param mosel optional numeric to filter data by month
-#' @param wetdry logical; if \code{TRUE}, incorporate wet/dry differences (this will result in a call to \code{\link{anlz_fibwetdry}}, in which case \code{temporal_window} and \code{wet_threshold} are required). if \code{FALSE} (default), do not differentiate between wet and dry samples.
+#' @param wetdry logical; if \code{TRUE}, incorporate wet/dry differences (this will result in a call to \code{\link{anlz_fibwetdry}}, in which case \code{temporal_window} and \code{wet_threshold} are required). If \code{FALSE} (default), do not differentiate between wet and dry samples.
 #' @param precipdata input data frame as returned by \code{\link{read_importrain}}. columns should be: station, date (yyyy-mm-dd), rain (in inches). The object \code{\link{catchprecip}} has this data from 1995-2023 for select Enterococcus stations. If \code{NULL}, defaults to \code{\link{catchprecip}}.
 #' @param temporal_window numeric; required if \code{wetdry} is \code{TRUE}. number of days precipitation should be summed over (1 = day of sample only; 2 = day of sample + day before; etc.)
 #' @param wet_threshold  numeric; required if \code{wetdry} is \code{TRUE}. inches accumulated through the defined temporal window, above which a sample should be defined as being from a 'wet' time period

R/show_enteromap.R

@@ -12,14 +12,11 @@
 #' @export
 #'
 #' @examples
-#' \dontrun{
 #' show_enteromap(enterodata, yrsel = 2020, mosel = 9)
 #'
 #' # wet/dry samples
 #' show_enteromap(enterodata, yrsel = 2020, mosel = 9, wetdry = TRUE,
 #'                temporal_window = 2, wet_threshold = 0.5)
-#' }
-
 show_enteromap <- function(fibdata, yrsel, mosel, wetdry = FALSE,
                            precipdata = NULL, temporal_window = NULL,
                            wet_threshold = NULL){