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temporary PR before moving ET branch#5

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vvbragin wants to merge 14 commits intodevsuny-downstate-medical-center/tvb-multiscale:devfrom netpyne-thalamic-vimsuny-downstate-medical-center/tvb-multiscale:netpyne-thalamic-vimCopy head branch name to clipboard

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Commits

Commits on Nov 16, 2022

• work in progress: thalamic VIM network example

  vvbragin

  committed
  2b73b9f

• work in progress: thalamic VIM network example (some fixes)

  vvbragin

  committed
  c4daf10

Commits on Nov 21, 2022

• tvb-netpyne: fixed bug in managing time intervals for spiking sim

  vvbragin

  committed
  3b50eb3

Commits on Nov 24, 2022

• tvb-netpyne: one more fix in managing time intervals for spiking sim

  vvbragin

  committed
  dd22e64

Commits on Jan 5, 2023

• Merge branch 'master' into netpyne-thalamic-vim

  vvbragin

  committed
  191ebaa

• added wilson cowan netw. builder for ET example

  vvbragin

  committed
  a52f8c4

Commits on Jan 17, 2023

• Update wilson_cowan.py

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  roopa-pai

  committed
  fad349c

Commits on Jan 18, 2023

• rename wilson_cowan.py

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  roopa-pai

  committed
  b411d0a

• add test comment

  roopa-pai

  committed
  d3970c5

Commits on Jan 19, 2023

• use specific spiking populations to interface with TVB nodes

  vvbragin

  committed
  601aa57

Commits on May 25, 2023

• added multiscale notebook Valery sent, which is a modified version of the BG annarchy notebook, but made to use with netpyne. I modified it to work in the container with the thalamus as the only re…

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  roopa-pai

  committed
  669264b

• add restructuring and changes to other files

  roopa-pai

  committed
  7850206

• add jupyter notebook Valery created, Roopa-TVB-corr-cortex-opt.ipynb. Not to run, just for reference while modifying Roopa-TVB-corr-cortex-opt.py.

  roopa-pai

  committed
  4a6eee5

• added matplotlib plots for connectivity and tract lengths. added back print statements for interface configurations

  roopa-pai

  committed
  14b6dbd