update codecov config

.coveragerc

@@ -0,0 +1,12 @@
+[run]
+omit =
+  sunkit_iamge/cython_version*
+  sunkit_iamge/extern/*
+  sunkit_iamge/version*
+  sunkit_iamge/data/sample.py
+  sunkit_iamge/data/_sample.py
+  */sunkit_iamge/cython_version*
+  */sunkit_iamge/extern/*
+  */sunkit_iamge/version*
+  */sunkit_iamge/data/sample.py
+  */sunkit_iamge/data/_sample.py

.github/workflows/ci.yml

@@ -29,6 +29,8 @@ jobs:
       posargs: -n auto
       envs: |
         - linux: py312
+    secrets:
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
   test:
     needs: [core]
@@ -42,6 +44,8 @@ jobs:
         - macos: py310
         - windows: py311
         - linux: py310-oldestdeps
+    secrets:
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
   docs:
     needs: [test]
@@ -69,6 +73,8 @@ jobs:
       posargs: -n auto --dist loadgroup
       envs: |
         - linux: py312-online
+    secrets:
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
   devdeps:
     needs: [online]
@@ -80,6 +86,8 @@ jobs:
       posargs: -n auto
       envs: |
         - linux: py312-devdeps
+    secrets:
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
   conda:
     needs: [online]

.codecov.yaml → codecov.yml

@@ -1,8 +1,10 @@
-codecov:
-  token: c78028e5-8778-47c6-97af-94b0bb99fc9a
-comment: off
+comment: false
 coverage:
   status:
     project:
       default:
         threshold: 0.2%
+codecov:
+  require_ci_to_pass: false
+  notify:
+    wait_for_ci: true

pytest.ini

@@ -1,4 +1,5 @@
 [pytest]
+minversion = 7.0
 testpaths = "sunkit_image" "docs"
 norecursedirs = ".tox" "build" "docs[\/]_build" "docs[\/]generated" "*.egg-info" "examples" "sunkit_image[/\]_dev" ".jupyter" ".history" "tools" "sunkit_image[\/]extern"
 doctest_plus = enabled
@@ -11,8 +12,6 @@ markers =
     online: marks this test function as needing online connectivity.
     mpl_image_compare: marks this test function as using hash-based Matplotlib figure verification. This mark is not meant to be directly applied, but is instead automatically applied when a test function uses the @sunpy.tests.helpers.figure_test decorator.
 remote_data_strict = True
-# Pin junit behaviour; we might want to update this to xunit2 at some point
-junit_family=xunit1
 filterwarnings =
     error
     # Do not fail on pytest config issues (i.e. missing plugins) but do show them

tox.ini

@@ -23,22 +23,15 @@ description =
 setenv =
     MPLBACKEND = agg
     COLUMNS = 180
-    PYTEST_COMMAND = pytest -vvv -ra --pyargs sunkit_image --cov-report=xml --cov=sunkit_image {toxinidir}/docs
+    PYTEST_COMMAND = pytest -vvv -r fEs --pyargs sunkit_image --cov-report=xml --cov=sunkit_image --cov-config={toxinidir}/.coveragerc {toxinidir}/docs
     SUNPY_SAMPLEDIR = {env:SUNPY_SAMPLEDIR:{toxinidir}/.tox/{envname}/sample_data/}
-passenv =
-    HTTP_PROXY
-    HTTPS_PROXY
-    NO_PROXY
-    CIRCLECI
 deps =
     devdeps: git+https://github.com/scikit-image/scikit-image.git
     devdeps: git+https://github.com/sunpy/sunpy.git
     oldestdeps: sunpy<6.0
     oldestdeps: scikit-image<0.20.0
     oldestdeps: scipy<1.19.0
     oldestdeps: numpy<1.23.0
-    online: pytest-rerunfailures
-    online: pytest-timeout
     figure-!devdeps: astropy==5.3.1
     figure-!devdeps: matplotlib==3.7.2
     figure-!devdeps: sunpy==5.0.0
@@ -51,7 +44,7 @@ commands =
     !figure: pip freeze --all --no-input
     # We have online figure tests we don't want to run.
     !online-!figure: {env:PYTEST_COMMAND} {posargs}
-    online: {env:PYTEST_COMMAND} --reruns 2 --timeout=180 --remote-data=any {posargs}
+    online: {env:PYTEST_COMMAND} --remote-data=any {posargs}
     figure: /bin/bash -c "mkdir -p ./figure_test_images; python -c 'import matplotlib as mpl; print(mpl.ft2font.__file__, mpl.ft2font.__freetype_version__, mpl.ft2font.__freetype_build_type__)' > ./figure_test_images/figure_version_info.txt"
     figure: /bin/bash -c "pip freeze --all --no-input >> ./figure_test_images/figure_version_info.txt"
     figure: /bin/bash -c "cat ./figure_test_images/figure_version_info.txt"