add transcripts-to-gene for m38 and h38 fixes #2

stephenturner · Feb 2, 2016 · e42a2c1 · e42a2c1
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Showing 9 changed files with 67 additions and 4 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,13 +1,14 @@
 Package: annotables
 Type: Package
 Title: Ensembl Annotation Tables
-Version: 0.1.0
+Version: 0.1.1
 Author: Stephen Turner
 Maintainer: Stephen Turner <[email protected]>
 Description: Provides tables for converting and annotating Ensembl Gene IDs.
 License: GPL-3
 LazyData: TRUE
-Depends: R (>= 3.1.2)
+Depends:
+    R (>= 3.1.2)
 Suggests:
     dplyr
-RoxygenNote: 5.0.0
+RoxygenNote: 5.0.1
diff --git a/R/grch38_tg.R b/R/grch38_tg.R
@@ -0,0 +1,9 @@
+#' Human GRCh38.p3 genes-to-transcripts
+#'
+#' Human GRCh38.p3 Ensembl transcript IDs to gene IDs from Ensembl release 82.
+#'
+#' @examples
+#' head(grch38_tg)
+#'
+#' @source \url{http://useast.ensembl.org/Homo_sapiens}
+"grch38_tg"
diff --git a/R/grcm38_tg.R b/R/grcm38_tg.R
@@ -0,0 +1,9 @@
+#' Mouse GRCm38.p4 genes-to-transcripts
+#'
+#' Mouse GRCm38.p4 Ensembl transcript IDs to gene IDs from Ensembl release 82.
+#'
+#' @examples
+#' head(grcm38_tg)
+#'
+#' @source \url{http://useast.ensembl.org/Mus_musculus}
+"grcm38_tg"
diff --git a/data/grch38_tg.rda b/data/grch38_tg.rda
diff --git a/data/grcm38_gt.rda b/data/grcm38_gt.rda
diff --git a/data/grcm38_tg.rda b/data/grcm38_tg.rda
diff --git a/man/grch38_tg.Rd b/man/grch38_tg.Rd
diff --git a/man/grcm38_gt.Rd b/man/grcm38_gt.Rd
diff --git a/man/grcm38_tg.Rd b/man/grcm38_tg.Rd