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@statgen

Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

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  1. pheweb pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python 160 67

  2. locuszoom locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    JavaScript 156 29

  3. demuxlet demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    C++ 122 26

  4. bamUtil bamUtil Public

    C++ 89 30

  5. SLURM-examples SLURM-examples Public

    Python 87 29

  6. locuszoom-standalone locuszoom-standalone Public

    Create regional association plots from GWAS or meta-analysis

    Python 59 19

Repositories

Showing 10 of 112 repositories
  • bravo_data_prep Public

    Work flows and tools to create data that backs the BRAVO API.

    statgen/bravo_data_prep’s past year of commit activity
    C++ 0 MIT 2 6 0 Updated Dec 2, 2024
  • savant Public

    Sparse Allele Vector AssociatioN Tool

    statgen/savant’s past year of commit activity
    C++ 0 MPL-2.0 0 0 0 Updated Nov 27, 2024
  • topmed_variant_calling Public
    statgen/topmed_variant_calling’s past year of commit activity
    C++ 23 Apache-2.0 3 3 0 Updated Nov 27, 2024
  • bravo_vue Public

    BRAVO's Vue JS based UI.

    statgen/bravo_vue’s past year of commit activity
    Vue 0 0 14 12 Updated Nov 19, 2024
  • bravo_api Public

    Server side data processing and retrieval endpoints for BRAVO

    statgen/bravo_api’s past year of commit activity
    Python 1 MIT 2 16 0 Updated Nov 19, 2024
  • imputationserver Public Forked from genepi/imputationserver

    TOPMED Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

    statgen/imputationserver’s past year of commit activity
    Java 5 AGPL-3.0 43 0 0 Updated Nov 5, 2024
  • nullmetal Public
    statgen/nullmetal’s past year of commit activity
    C++ 0 0 0 0 Updated Sep 6, 2024
  • encore Public

    Encore Analysis Server

    statgen/encore’s past year of commit activity
    Python 13 AGPL-3.0 6 0 5 Updated Aug 23, 2024
  • terraform-aws-imputation-server Public

    A set of Terraform Modules for deploying an imputation server on AWS

    statgen/terraform-aws-imputation-server’s past year of commit activity
    HCL 0 Apache-2.0 2 0 0 Updated Aug 19, 2024
  • raremetal Public

    A flexible tool for meta-analysis

    statgen/raremetal’s past year of commit activity
    C++ 9 9 29 1 Updated Jul 31, 2024
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