Phyloseq_for_microbial_diversity

Pipeline for the analysis of microbial diversity with Phyloseq in R

Source

This pipeline was created following the manuscript phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data and other blogs, including Phyloseq tutorial and phyloseq

Data

The data used for this pipeline was obtained from the project: Effect of hydrochar from acid hydrolysis on anaerobic digestion of chicken manure