int: codespell happy

README.md

@@ -97,7 +97,7 @@ git checkout master
 git branch --set-upstream-to=upstream/master
 
 # !!! VERY IMPORTANT !!!
-# Set the deafult push to origin, in order NOT to push by mistake to upstream.
+# Set the default push to origin, in order NOT to push by mistake to upstream.
 git config remote.pushDefault origin
 
 # Install package with pip using the developer mode and the `[dev]` label

phys2cvr/_version.py

@@ -292,7 +292,7 @@ def git_pieces_from_vcs(tag_prefix, root, verbose, run_command=run_command):
         # TAG-NUM-gHEX
         mo = re.search(r"^(.+)-(\d+)-g([0-9a-f]+)$", git_describe)
         if not mo:
-            # unparseable. Maybe git-describe is misbehaving?
+            # unparsable. Maybe git-describe is misbehaving?
             pieces["error"] = "unable to parse git-describe output: '%s'" % describe_out
             return pieces
 

phys2cvr/cli/run.py

@@ -25,7 +25,7 @@ def _get_parser():
             "to estimate CVR maps."
             "It can also be used to generate "
             "regressors to run the estimation "
-            "with other softwares.\n"
+            "with other software.\n"
             f"Version {__version__}"
         ),
         add_help=False,
@@ -305,7 +305,7 @@ def _get_parser():
     )
 
     title_opt_r2model = parser.add_argument_group(
-        "Optional Arguments to select R^2 model " "for regresion step"
+        "Optional Arguments to select R^2 model for regression step"
     )
 
     opt_r2model = title_opt_r2model.add_mutually_exclusive_group()

phys2cvr/io.py

@@ -96,7 +96,7 @@ def check_ext(all_ext, fname, remove=False):
     fname : str
         The filename to check
     remove : bool, optional
-        Remove the extention from fname if it has one
+        Remove the extension from fname if it has one
 
     Returns
     -------
@@ -149,7 +149,7 @@ def check_nifti_dim(fname, data, dim=4):
     if len(data.shape) < dim:
         raise ValueError(
             f"{fname} does not seem to be a {dim}D file. "
-            f"Plase provide a {dim}D nifti file."
+            f"Please provide a {dim}D nifti file."
         )
     if len(data.shape) > dim:
         LGR.warning(f"{fname} has more than {dim} dimensions. Removing D > {dim}.")

versioneer.py

@@ -179,7 +179,7 @@
   `setup.cfg`, and `tox.ini`. Projects like these produce multiple PyPI
   distributions (and upload multiple independently-installable tarballs).
 * Source trees whose main purpose is to contain a C library, but which also
-  provide bindings to Python (and perhaps other langauges) in subdirectories.
+  provide bindings to Python (and perhaps other languages) in subdirectories.
 
 Versioneer will look for `.git` in parent directories, and most operations
 should get the right version string. However `pip` and `setuptools` have bugs
@@ -700,7 +700,7 @@ def git_pieces_from_vcs(tag_prefix, root, verbose, run_command=run_command):
         # TAG-NUM-gHEX
         mo = re.search(r'^(.+)-(\d+)-g([0-9a-f]+)$', git_describe)
         if not mo:
-            # unparseable. Maybe git-describe is misbehaving?
+            # unparsable. Maybe git-describe is misbehaving?
             pieces["error"] = ("unable to parse git-describe output: '%%s'"
                                %% describe_out)
             return pieces
@@ -1107,7 +1107,7 @@ def git_pieces_from_vcs(tag_prefix, root, verbose, run_command=run_command):
         # TAG-NUM-gHEX
         mo = re.search(r"^(.+)-(\d+)-g([0-9a-f]+)$", git_describe)
         if not mo:
-            # unparseable. Maybe git-describe is misbehaving?
+            # unparsable. Maybe git-describe is misbehaving?
             pieces["error"] = "unable to parse git-describe output: '%s'" % describe_out
             return pieces