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Revert "update ci to ubuntu 24.04"
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This reverts commit cec131f.

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zeehio committed May 8, 2024
1 parent cec131f commit d39b08e
Showing 1 changed file with 15 additions and 3 deletions.
18 changes: 15 additions & 3 deletions .github/workflows/check-bioc.yml
Original file line number Diff line number Diff line change
Expand Up @@ -55,13 +55,25 @@ jobs:
matrix:
config:
- {
os: ubuntu-24.04,
os: ubuntu-22.04,
conf_name: 'ubuntu',
r: '4.4',
bioc: '3.19',
cont: "bioconductor/bioconductor_docker:RELEASE_3_19",
rspm: "https://packagemanager.posit.co/cran/__linux__/noble/latest"
rspm: "https://packagemanager.rstudio.com/cran/__linux__/jammy/latest"
}
#- {
# os: ubuntu-latest,
# conf_name: 'ubuntu-r4.1',
# r: '4.1',
# bioc: '3.14',
# cont: "bioconductor/bioconductor_docker:RELEASE_3_14",
# rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/2022-04-21"
# }
#- { os: macOS-latest, r: '4.2', bioc: '3.16'}
#- { os: windows-latest, r: '4.2', bioc: '3.16'}
## Check https://github.com/r-lib/actions/tree/master/examples
## for examples using the http-user-agent
env:
CONF_NAME: ${{ matrix.config.conf_name }}
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
Expand Down Expand Up @@ -127,7 +139,7 @@ jobs:
- name: Install Linux system dependencies
if: runner.os == 'Linux'
run: |
sysreqs=$(Rscript -e 'cat("apt-get update -y && apt-get install -y", paste(gsub("apt-get install -y ", "", remotes::system_requirements("ubuntu", "24.04")), collapse = " "))')
sysreqs=$(Rscript -e 'cat("apt-get update -y && apt-get install -y", paste(gsub("apt-get install -y ", "", remotes::system_requirements("ubuntu", "22.04")), collapse = " "))')
echo $sysreqs
sudo -s eval "$sysreqs"
sudo apt-get install -y texlive-extra-utils texlive-latex-extra texlive-latex-base texlive-latex-recommended lmodern texlive-luatex texlive-full
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