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Fixed a compatibility issue by forcing version of meshio==4.4.6. Upda…
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…ted readme appropriately.
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siboles committed Dec 24, 2021
1 parent 6f99ec7 commit f3b75f2
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4 changes: 2 additions & 2 deletions README.md
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Expand Up @@ -24,7 +24,7 @@ conda config --add channels conda-forge
One can then create an isolated conda environment with all necessary dependencies with the command:

```
conda create -n NAME_OF_ENVIRONMENT febio pygalmesh vtk pyyaml pandas scipy seaborn wquantiles
conda create -n NAME_OF_ENVIRONMENT febio pygalmesh vtk pyyaml pandas scipy seaborn wquantiles meshio=4.4.6
```

where, NAME_OF_ENVIRONMENT, is the user's choice. To use the bioMultiScale Python package
Expand Down Expand Up @@ -100,7 +100,7 @@ python -m bioMultiScale.read_tissue_plot PATH_TO_MODEL_SOLUTION_FILE all

where the "all" indicates all time steps. Alternatively, a list of time values separated by spaces can be provided.

This will create a directory with named BASENAME_OF_SOLUTION_FILE_vtk_files and contain vtk polydate files for each
This will create a directory named BASENAME_OF_SOLUTION_FILE_vtk_files and contain vtk polydata files for each
time step requested. Also, the data.pvd file allows for proper import of all files into ParaView for animation with
proper time values.

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10 changes: 10 additions & 0 deletions src/setup.py
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@@ -0,0 +1,10 @@
try:
from setuptools.core import setup
except ImportError:
from distutils.core import setup

setup(
name='bioMultiScale',
version='0.0',
author='Scott Sibole',
packages=['bioMultiScale'])

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