The Jupyter notebooks in this repository accompany the paper Navigating the Pitfalls of Applying Machine Learning in Genomics.
Click the button below to launch the notebooks in your browser via Binder. This may take a few minutes.
Use conda or venv to create a local Python 3.9 environment, then run the following:
git clone https://github.com/shwhalen/ml-pitfalls.git
cd ml-pitfalls
pip install -r requirements.txt
jupyter notebook