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📝 Document FCP-INDI/C-PAC#2104
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ChildMindInstituteCNL committed May 8, 2024
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6 changes: 3 additions & 3 deletions docs/nightly/user/known-issues/FCP-INDI/C-PAC/2104.html
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<h3>Alternative<a class="headerlink" href="#alternative" title="Permalink to this heading"></a></h3>
<p>Running it normally, hitting a stall, and simply restarting the pipeline run also gets past it. That is, cancelling the stalled pipeline, and then re-starting it as-is via warm restart (if the Nipype working directory remains).</p>
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<section id="planned-resolution">
<h2>Planned resolution<a class="headerlink" href="#planned-resolution" title="Permalink to this heading"></a></h2>
<h3>Planned resolution<a class="headerlink" href="#planned-resolution" title="Permalink to this heading"></a></h3>
<ul class="simple">
<li><p>Removing FreeSurfer <code class="docutils literal notranslate"><span class="pre">recon-all</span></code> as a workflow within C-PAC, instead requiring its outputs as input data for configurations that involve surface analysis.</p></li>
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</article>
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<li><a class="reference internal" href="#workarounds">Workarounds</a><ul>
<li><a class="reference internal" href="#preferred">Preferred</a></li>
<li><a class="reference internal" href="#alternative">Alternative</a></li>
<li><a class="reference internal" href="#planned-resolution">Planned resolution</a></li>
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<li><a class="reference internal" href="#planned-resolution">Planned resolution</a></li>
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"cells": [
{
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"metadata": {},
"source": [
"# Visualize observed usage\n",
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{
"cell_type": "code",
"execution_count": 4,
"id": "c5107aef",
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"outputs": [
{
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