add printf style formatting to Rf_error calls to resolve format-secur… #164
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| name: Matlab (ubuntu) build and test | |
| on: [push] | |
| env: | |
| MATLAB_VERSION: R2021a | |
| CC: gcc-9 | |
| CXX: g++-9 | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - uses: seanmiddleditch/gha-setup-ninja@master | |
| - name: Set up MATLAB | |
| uses: matlab-actions/setup-matlab@v1 | |
| # with: | |
| # release: ${{ env.MATLAB_VERSION }} | |
| - name: Install Ubuntu dependencies | |
| shell: bash | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y check ccache | |
| git clone https://github.com/libexpat/libexpat | |
| cmake -G Ninja -DCMAKE_POSITION_INDEPENDENT_CODE=ON -DEXPAT_BUILD_TESTS=OFF -DEXPAT_BUILD_TOOLS=OFF -DEXPAT_BUILD_EXAMPLES=OFF -DEXPAT_SHARED_LIBS=OFF -DCMAKE_INSTALL_PREFIX=./dependencies -B libexpat -S libexpat/expat | |
| cmake --build libexpat | |
| cmake --install libexpat | |
| - name: Create Build Environment | |
| run: cmake -E make_directory ${{runner.workspace}}/build | |
| # - name: Setup tmate session | |
| # uses: mxschmitt/action-tmate@v3 | |
| - name: Configure | |
| shell: bash | |
| working-directory: ${{runner.workspace}}/build | |
| run: | | |
| cmake $GITHUB_WORKSPACE \ | |
| -G "Ninja" \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DWITH_CHECK=ON \ | |
| -DWITH_LIBXML=OFF \ | |
| -DWITH_EXPAT=ON \ | |
| -DWITH_MATLAB=ON \ | |
| -DWITH_STABLE_PACKAGES=ON | |
| - name: Build | |
| working-directory: ${{runner.workspace}}/build | |
| shell: bash | |
| run: | | |
| cmake --build . --config Debug --target matlab_binding_TranslateSBML | |
| cmake --build . --config Debug --target matlab_binding_OutputSBML | |
| - name: Run Test | |
| uses: matlab-actions/run-command@v1 | |
| with: | |
| command: cd('../build/src/bindings/matlab/test'); runTests |