- 👋 Hi, I’m Rachel
- 👀 I’m a Bioinformatics Master’s student with a background in the wet-lab and work experience in Python and Illumina Next Generation DNA Sequencing!
- 🧪 Currently experimenting with: Seurat and scikit-learn
- 📫 How to reach me [email protected]
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supervised_classifier
supervised_classifier PublicA supervised learning script using scikit-learn that classifies prostate cancer gene expression data into early and late stage cancer.
Jupyter Notebook
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rshiny_app
rshiny_app PublicThis Shiny app provides an interactive interface to analyze gene expression data through various modules, including data summary, counts matrix processing, differential expression analysis, and tra…
R
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analyze_GFF_features
analyze_GFF_features PublicDownloads the GFF feature files of a user-specified human chromosome from ENSEMBL. Returns the counts of all features of the specific chromosome and top 10 transcripts with highest number of exon, …
Shell
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snp_calling_workflow
snp_calling_workflow PublicA SNP-Calling Workflow for genes involved in Alzheimer's using Snakemake.
Python
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