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Clean up schema and dependencies #114

Merged
merged 52 commits into from
Oct 31, 2024
Merged

Clean up schema and dependencies #114

merged 52 commits into from
Oct 31, 2024

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landmanbester
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@landmanbester
set dask logging level when setting up client
83684ea
@landmanbester
remove exitstack from grid worker
300b275
@landmanbester
use built in numba.set_num_threads to set the number of threads to us…
bd68b5c 
…e instead of manual version
@landmanbester
remove QuartiCal dependency
1ff7673
@landmanbester
set nthreads=1 in test suite
446df17
@landmanbester
add bokeh dependency and don't lose protocol in output-filename
4cc7069
@landmanbester
catch and raise errors returned by futures
3ab346d
@landmanbester
report numba cache dir for validation
d0a6a99
@landmanbester
more general hess_psf operator
d2fe71a
@landmanbester
fix failing tests. Report timings in pcg. Plot residual histograms af…
0973d5c 
…ter reweighting
@landmanbester
optimise simple task for large arrays
fd195a1
@landmanbester
compare cube to per slice hess
8d0d3e8
@landmanbester
explicitly check if ac_iter is empty and break out of loop if it is
74e8e71
@landmanbester
add direction dependent predict
06144d6
@landmanbester
fix typo in degrid
cd46ac4
@landmanbester
drop last two axes of wcs before rendering region to mask
94b36ec
@landmanbester
transpose region mask in degridder
0d82069
@landmanbester
stokes2vis return None when all data are flagged in a chunk
9947a5a
@landmanbester
Merge branch 'ddpredict' into outputs
e09fa01
@landmanbester
fix typo in pcg for fluxmop
5f0539d
@landmanbester
don't drop DIRTY in pcg for fluxmop
4af9f14
@landmanbester
Merge branch 'ddpredict' into outputs
0524470
@landmanbester
don't strip protocall in basename
956e803
@landmanbester
don't strip protocall in basename also in fluxmop
fa5bf79
@landmanbester
optionally use stack.enter_context
234b6c9
@landmanbester
add regions dependency
663db16
@landmanbester
report load location in xds_from_url call
581f664
@landmanbester
keep protocol in tact when globbing from object stores
bf9395c
@landmanbester
use s3fs directly with pickle instead of boto3
4c3d939
@landmanbester
explicitly resize_thread_pool in gridding workers
87aca03
@landmanbester
more consistent use of xds_from_url
f4b3b70
@landmanbester
make wgridder calls more verbose
358ff07
@landmanbester
parallel norm_diff and print sara timings in fractions
366f44b
@landmanbester
time residual steps
c540401
@landmanbester
attempt to write to zarr in separate thread
6a84862
@landmanbester
don't write unnecessary data vars during major cycle
a514a43
@landmanbester
better use of numba in pcg
215a9d4
@landmanbester
use --model-name and --residual-name parameters in restore worker
c3f0ee9
@landmanbester
Merge branch 'ddpredict' into outputs
90b85db
@landmanbester
revert numba updates in pcg
55882b6
@landmanbester
don't use exitstack in degrid
f69f699
@landmanbester
Merge branch 'ddpredict' into outputs
90eefda
@landmanbester
pass jit options correctly to overload
1a61ca9
@landmanbester
resize ducc thread pool in comps2vis
df9c779
@landmanbester
report mean and var ressq before and after reweighting
cee6165
@landmanbester
make beam computational optional in grid worker
98da2e1
@landmanbester
allow missing antennas by relabelling ant1 and ant2 by index
3acfded
@landmanbester
downweight extrapolated edges in model2comps
6590170
@landmanbester
don't select out frow before antenna sanity check in stokes2vis
699d5a5
@landmanbester
add outputs and read degrid chan mapping from dds by default
064cad6
@landmanbester
rename fluxmop -> fluxtractor
c974a0a
@landmanbester
only print timings if verbosity larger than 1
ff2831c
@landmanbester landmanbester merged commit 8daa97f into main Oct 31, 2024
4 checks passed
@landmanbester landmanbester deleted the outputs branch October 31, 2024 16:59
@landmanbester landmanbester mentioned this pull request Nov 7, 2024
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@landmanbester