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Open source code from the R-HTA workshop held on 28th June - 2nd July 2024

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R-HTA Workshop '24 | Open Souce Code Examples

This repository contains open-source code examples from the R-HTA workshop held on 28th June - 2nd July 2024.

For more information please see the main website, or contact Robert Smith at [email protected].

Materials

Links to external materials can be found in the table below, thanks to Wael Mohammed for updating this throughout the workshop as new slides were made available.

Friday 28th June 2024

Author Title Institution Links
Robert Smith & Tom Ward assertHE: an R package to improve quality assurance of health economic models Dark Peak Analytics, UoS & GSK R package; Slides; Paper; Video
Dawn Lee & Darren Burns Learnings from the design of a pathway model in R Peninsula Technology Assessment Group (PenTAG) Paper; slides
Stuart Wright Improving the speed of a discrete event simulation model in breast cancer screening: The experience of an intermediate level R user University of Manchester Slides
Andrew Pijper & Jamie Kettle Methods for estimating Healthy Life Expectancy LCP Health Analytics Slides
Lewis Michaelwaite The design and development of the easyBIM R package Maple Health Group Slides
Michael O’Donnell REEEVR - Automated Conversion of Excel to R University of Bristol Slides
Alfredo Mariani The advantages and challenges of using R and Shiny to develop diagnostic pathway models for NICE clinical guidelines NICE Slides
Shubhram Pandey R-Shiny tool to pool Kaplan Meier curves from single-arm studies using a distribution-free approach heoRlytics Slides
Paul Schneider Building Shiny Apps for Health Economic Models: A Practical Guide Dark Peak Analytics Slides

Monday 1st July 2024

Author Title Institution Links
Junwen Zhou Estimating Costs Associated with Disease Model States Using Generalized Linear Models in R University of Oxford Slides
Sven Klijn Modeling the Future: Pioneering the First Dossier Submission with R Bristol Myers Squibb Slides
Zachary Waller Spending time to save time: strategies for making your code run faster Queen’s University Belfast Slides
Jean-Etienne Poirrier Using R for Health Economics Modelling in Consulting: R (are) We There Yet? Parexel Slides
Hawre Jalal Introducing Grammar of Modeling R package (gmod) and the Decision Twigs graphical user interface for building HTA models University of Ottawa Slides
Panel Building capacity in the use of R for HTA Jean-Etienne Poirrier

Tuesday 2nd July 2024

Author Title Institution Links
Andrew Clark Cross-referencing and aggregating multiple independent sources to estimate subgroup-level values: The EQ-5D utility of emicizumab in severe haemophilia A Delta Hat Slides
Anna Grootendorst Application of RShiny as a Strategic Tool for Evidence-Based Payer Engagement in Nordic Influenza Vaccine Tenders NHTA, CSL Seqirus Slides
Niccolò Morgante Early modelling of ileostomy management systems: showcasing value in RShiny NHTA Slides
Jack Ettinger Assessing the Cost-effectiveness of Warmth on Prescription Schemes for COPD Patients: A Markov Model Analysis Using R Parexel Slides
Dominic Muston An R package to inform structural assumptions for three state oncology cost-effectiveness models and examine the impact of adjusting for background mortality (psm3mkv) MSD Slides
Annachiara Rossi A User-Friendly R-Shiny Application for Indirect Treatment Comparisons in Health Technology Assessment Novo Nordisk Slides
Victoria Zaitceva Analysing the Interval from Marketing Authorization to HTA Outcomes in High-Income Countries Using the Shiny Dashboard HIVE Health Optimum Slides

Contributing to this repository

Please feel free to submit a pull request into this repository with your material added to the 'content' folder, alternatively email your materials in a single folder containing a file called README.md in the top level, which describes the code, to [email protected] and we will upload for you.

Using this repository

Please feel free to clone this repository to your machine, or download the files as a zip folder. This can be done by clicking on the green button on the top right.

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If you have downloaded the ZIP, please ensure that you unzip the folder and then click on the R project file to load the project into RStudio.

We hope you find the content useful!

Rob (On behalf of the wider R-HTA team)

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Open source code from the R-HTA workshop held on 28th June - 2nd July 2024

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