0.7.6

quiltdata · Jan 11, 2024 · fb15b37 · fb15b37
1 parent da64dd6
commit fb15b37
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,19 +1,23 @@
 # Changelog
 
+## [0.7.6] 2024-01-10 UNOFFICIAL
+
+- Re-enable crash on failure
+
 ## [0.7.5] 2023-10-17
 
 - Grab all multiqc subfolders
 
-## [0.7.4] 2023-10-16b
+## [0.7.4] 2023-10-16b UNOFFICIAL
 
 - Actually print the exception stack trace
 - `make install` to enable nextflow testing
 
-## [0.7.3] 2023-10-16a
+## [0.7.3] 2023-10-16a UNOFFICIAL
 
 - Catch and log exception on push failure
 
-## [0.7.2] 2023-10-16
+## [0.7.2] 2023-10-16 UNOFFICIAL
 
 - Throw exceptions on push failure
 
@@ -26,7 +30,7 @@
 
 - Officially QuiltCore 0.1.0 instead of Python
 
-## [0.6.0] 2023-10-03
+## [0.6.0] 2023-10-03 UNOFFICIAL
 
 (interim release still using Python)
 
@@ -36,7 +40,7 @@
   - Top level (only): md, html, pdf, csv, tsv
   - multiqc sub-folder HTML
 
-## [0.5.0] 2023-09-04
+## [0.5.0] 2023-09-04 UNOFFICIAL
 
 - Switch to quiltcore-java [NOTE: this pre-release does NOT check workflows]
 - Do not pre-install packages (only install before write)

diff --git a/README.md b/README.md
@@ -75,8 +75,8 @@ From the command-line, do, e.g.:
 
 ```bash
 # export NXF_VER=23.04.3
-export NXF_PLUGINS_TEST_REPOSITORY=https://github.com/quiltdata/nf-quilt/releases/download/0.7.5/nf-quilt-0.7.5-meta.json
-nextflow run main.nf -plugins [email protected].5
+export NXF_PLUGINS_TEST_REPOSITORY=https://github.com/quiltdata/nf-quilt/releases/download/0.7.6/nf-quilt-0.7.6-meta.json
+nextflow run main.nf -plugins [email protected].6
 ```
 
 For Tower, you can use the "Pre-run script" to set the environment variables.

diff --git a/plugins/nf-quilt/src/main/nextflow/quilt/jep/QuiltPackage.groovy b/plugins/nf-quilt/src/main/nextflow/quilt/jep/QuiltPackage.groovy
@@ -233,7 +233,7 @@ class QuiltPackage {
         Manifest.Builder builder = Manifest.builder()
 
         Files.walk(packageDest()).filter(f -> Files.isRegularFile(f)).forEach(f -> {
-            log.debug(f)
+            log.debug("push: ${f} -> ${packageDest()}")
             String logicalKey = packageDest().relativize(f)
             LocalPhysicalKey physicalKey = new LocalPhysicalKey(f)
             long size = Files.size(f)

diff --git a/plugins/nf-quilt/src/resources/META-INF/MANIFEST.MF b/plugins/nf-quilt/src/resources/META-INF/MANIFEST.MF
@@ -1,7 +1,7 @@
 Manifest-Version: 1.0
 Plugin-Class: nextflow.quilt.QuiltPlugin
 Plugin-Id: nf-quilt
-Plugin-Version: 0.7.5
+Plugin-Version: 0.7.6
 Plugin-Provider: Quilt Data
 Plugin-Requires: >=22.10.6