Adds research-dataset-schema.yaml and testing data

Makefile

@@ -21,7 +21,8 @@ build/context.jsonld: src/linkml/ontology.yaml
 		--mergeimports \
 		$< > $@
 
-build/linkml-docs: build/linkml-docs/ontology build/linkml-docs/data-access-schema
+build/linkml-docs: build/linkml-docs/ontology build/linkml-docs/data-access-schema \
+	build/linkml-docs/research-dataset-schema
 build/linkml-docs/%: src/linkml/%.yaml src/extra-docs/%
 	gen-doc \
 		--mergeimports \
@@ -45,7 +46,8 @@ build/mkdocs-site: build/linkml-docs src/extra-docs/*.md
 # add additional schemas to lint here
 check: \
 	check-data-access-schema \
-	check-ontology
+	check-ontology \
+	check-research-dataset-schema
 check-%: src/linkml/%.yaml
 	@echo [Check $<]
 	@echo "Run linter"
@@ -75,7 +77,8 @@ check-%: src/linkml/%.yaml
 # naming schema <class>-<example-name>.yaml to be
 # usable as documentation examples for `gen-doc`
 validate-examples: \
-	validate-examples-data-access-schema
+	validate-examples-data-access-schema \
+	validate-examples-research-dataset-schema
 validate-examples-%:
 	$(MAKE) validate-valid-examples-$* validate-invalid-examples-$*
 validate-valid-examples-%: src/linkml/%.yaml src/examples/%

src/counter-examples/research-dataset-schema/ResearchDataset-missing_fields.json

@@ -0,0 +1,5 @@
+{
+    "license": "https://creativecommons.org/publicdomain/zero/1.0/",
+    "homepage": "https://github.com/allisonhorst/palmerpenguins",
+    "title": "Palmer Penguins"
+}

src/examples/research-dataset-schema/ResearchDataset-penguins.yaml

@@ -0,0 +1,74 @@
+license: https://creativecommons.org/publicdomain/zero/1.0/
+homepage: https://github.com/allisonhorst/palmerpenguins
+name: penguins
+title: Palmer Penguins
+doi: https://doi.org/10.5281/zenodo.3960218
+version: 0.1.0
+date_modified: '2020-07-16'
+description: The goal of palmerpenguins is to provide a great dataset for data exploration
+  and visualization, as an alternative to iris. Data were collected and made available
+  by Dr. Kristen Gorman and the Palmer Station, Antarctica LTER, a member of the Long
+  Term Ecological Research Network.
+data_controller:
+  - email: [email protected]
+    name: Allison Horst
+keywords:
+  - penguins
+  - sea ice
+  - foraging
+  - ecological niches
+  - islands
+  - antarctica
+  - animal sexual behavior
+  - isotopes
+has_part:
+  - checksum_md5: e7e2be6b203a221949f05e02fcefd853
+    content_url: https://portal.edirepository.org/nis/dataviewer?packageid=knb-lter-pal.219.3&entityid=002f3893385f710df69eeebe893144ff
+    path_posix: raw/adelie.csv
+    size_in_bytes: 23755
+    metatype: dlco:File
+  - checksum_md5: 1549566fb97afa879dc9446edcf2015f
+    content_url: https://portal.edirepository.org/nis/dataviewer?packageid=knb-lter-pal.220.3&entityid=e03b43c924f226486f2f0ab6709d2381
+    path_posix: raw/gentoo.csv
+    size_in_bytes: 11263
+    metatype: dlco:File
+  - checksum_md5: e4b0710c69297031d63866ce8b888f25
+    content_url: https://portal.edirepository.org/nis/dataviewer?packageid=knb-lter-pal.221.2&entityid=fe853aa8f7a59aa84cdd3197619ef462
+    path_posix: raw/chinstrap.csv
+    size_in_bytes: 18872
+    metatype: dlco:File
+author:
+  - author_type: person
+    orcid: 0000-0002-6047-5564
+    affiliation:
+    - 'UC Santa Barbara: Santa Barbara, CA, US'
+    email: [email protected]
+    name: Allison Horst
+  - author_type: person
+    orcid: 0000-0002-8082-1890
+    affiliation:
+    - 'RStudio: Boston, MA, US'
+    email: [email protected]
+    name: Alison Hill
+  - author_type: person
+    orcid: 0000-0002-0258-9264
+    affiliation:
+    - 'University of Alaska Fairbanks: Fairbanks, AK, US'
+    email: [email protected]
+    name: Kristen Gorman
+publication:
+  - citation: 'Gorman KB, Williams TD, Fraser WR (2014) Ecological Sexual Dimorphism
+      and Environmental Variability within a Community of Antarctic Penguins (Genus
+      Pygoscelis). PLoS ONE 9(3): e90081.'
+    date_published: '2014-03-05'
+    doi: https://doi.org/10.1371/journal.pone.0090081
+funding:
+  - funder: NSF-OPP
+    identifier: "#0217282"
+    url: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0217282&HistoricalAwards=false
+  - funder: NSF-OPP
+    identifier: "#0823101"
+    url: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0823101&HistoricalAwards=false
+  - funder: NSF-OPP
+    identifier: "#0741351"
+    url: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0741351&HistoricalAwards=false