Merge pull request #322 from project8/feature/metadata

Feature/metadata
project8 · Dec 10, 2024 · 68f6026 · 68f6026
2 parents 70d5886 + 4a77aba
commit 68f6026
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Showing 27 changed files with 905 additions and 43 deletions.
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -189,12 +189,18 @@ if (ROOT_FOUND)
     add_definitions(-DROOT_FOUND)
     pbuilder_add_ext_libraries (${ROOT_LIBRARIES})
     message(STATUS "ROOT_LIBRARIES is ${ROOT_LIBRARIES}")
+    message(STATUS "ROOT_INCLUDE_DIRS is ${ROOT_INCLUDE_DIRS}")
 else (ROOT_FOUND)
     message(STATUS "Building without ROOT")
     remove_definitions(-DROOT_FOUND)
 endif (ROOT_FOUND)
 include_directories (${ROOT_INCLUDE_DIR})
 
+option (locust_mc_USE_MPI "Use MPI to accelerate calculations using multiple processors" OFF)
+if (locust_mc_USE_MPI)
+    find_package(MPI REQUIRED)
+endif (locust_mc_USE_MPI)
+
 # Boost (1.46 required for filesystem version 3)
 list (APPEND Boost_COMPONENTS date_time filesystem program_options system thread)
 find_package (Boost 1.46.0 REQUIRED COMPONENTS ${Boost_COMPONENTS})

diff --git a/Source/Applications/Testing/testFFT.cc b/Source/Applications/Testing/testFFT.cc
@@ -73,6 +73,10 @@ double GetPower(bool bTime)
 		ptransform += data[j][0]*data[j][0]+data[j][1]*data[j][1];
 	}
 
+    fftw_destroy_plan( plan);
+    fftw_free( data );
+    data = NULL;
+
     if (bTime)
     {
     	LPROG(testlog, "power of original data time series is: " << pdata);

diff --git a/Source/Applications/Testing/testLMCTestSignal.cc b/Source/Applications/Testing/testLMCTestSignal.cc
@@ -113,6 +113,10 @@ class testLMCTestSignal
 	        ptransform += data[j][0]*data[j][0]+data[j][1]*data[j][1];
 	    }
 
+	    fftw_destroy_plan( plan);
+	    fftw_free( data );
+	    data = NULL;
+
 	    if (bTime)
 	    {
 	    	LPROG(testlog, "fft power of original data time series is: " << pdata);
@@ -161,6 +165,7 @@ TEST_CASE( "LMCTestSignal with default parameter values (pass)", "[single-file]"
 	double threshold = 1.e-4;
 	REQUIRE( fabs( aTestLMCTestSignal.GetPower(aSignal, N0, 1) - aTestLMCTestSignal.GetPower(aSignal, N0, 0) ) < threshold*aTestLMCTestSignal.GetPower(aSignal, N0, 1) );
 	REQUIRE( fabs( aTestLMCTestSignal.GetPower(aSignal, N0, 1)/N0/50. - pow(aTestLMCTestSignal.GetAmplitude(),2.) ) < threshold*aTestLMCTestSignal.GetPower(aSignal, N0, 1)/N0/50.);
+	aSignal->Reset();
 }
 
 
diff --git a/Source/Applications/Testing/testMockEGun.cc b/Source/Applications/Testing/testMockEGun.cc
@@ -103,7 +103,10 @@ double GetPower()
 	}
 
 	LPROG(testlog, "E-gun transformed data sum is: " << ptransform/N0);
+
 	fftw_destroy_plan(plan);
+	fftw_free( data );
+	data = NULL;
 
     return ptransform/N0;
 

diff --git a/Source/Applications/Testing/testMockFreeField.cc b/Source/Applications/Testing/testMockFreeField.cc
@@ -164,6 +164,8 @@ TEST_CASE( "Mock free space Larmor power. (pass)", "[single-file]" )
 
 
 	  fftw_destroy_plan(plan);
+	  fftw_free( data );
+	  data = NULL;
 
 
 	double threshold = 1.e-4;

diff --git a/Source/CMakeLists.txt b/Source/CMakeLists.txt
@@ -13,6 +13,7 @@ set( LOCUST_MC_HEADER_FILES
     Core/LMCHFSSResponseFileHandler.hh
     Core/LMCFIRFileHandler.hh
     Core/LMCTFFileHandler.hh	
+    Core/LMCMPIEnvironment.hh    
 
     Utilities/LMCUtility.hh
     Utilities/LMCCavityUtility.hh
@@ -34,8 +35,6 @@ set( LOCUST_MC_HEADER_FILES
     Generators/LMCTestSignalGenerator.hh
     Generators/LMCDecimateSignalGenerator.hh
     Generators/LMCLowPassFilterFFTGenerator.hh
-    Generators/LMCHighPassFilterFFTGenerator.hh
-    Generators/LMCLocalOscillatorGenerator.hh
     Generators/LMCButterworthLPFGenerator.hh
 
     Transmitters/LMCFieldBuffer.hh
@@ -108,8 +107,6 @@ set( LOCUST_MC_SOURCE_FILES
     Generators/LMCTestSignalGenerator.cc
     Generators/LMCDecimateSignalGenerator.cc
     Generators/LMCLowPassFilterFFTGenerator.cc
-    Generators/LMCHighPassFilterFFTGenerator.cc
-    Generators/LMCLocalOscillatorGenerator.cc
     Generators/LMCButterworthLPFGenerator.cc
 
 
@@ -146,16 +143,25 @@ set( LOCUST_MC_SOURCE_FILES
 
 )
 
+if (locust_mc_USE_MPI)
+    set( LOCUST_MC_HEADER_FILES ${LOCUST_MC_HEADER_FILES}
+        Core/LMCMPIInterface.hh
+    )
+
+    set( LOCUST_MC_SOURCE_FILES ${LOCUST_MC_SOURCE_FILES}
+        Core/LMCMPIInterface.cc
+    )
+endif (locust_mc_USE_MPI)
+
+
 if (locust_mc_BUILD_WITH_KASSIOPEIA)
     # Here we only need to add the Kassiopeia-dependent header/source files to the header/source-file lists
 
     set( LOCUST_MC_HEADER_FILES ${LOCUST_MC_HEADER_FILES}
-
         Generators/LMCFreeFieldSignalGenerator.hh
         Generators/LMCKassSignalGenerator.hh
         Generators/LMCArraySignalGenerator.hh
-        Generators/LMCCavitySignalGenerator.hh
-
+        Generators/LMCCavitySignalGenerator.hh        
 
         Transmitters/LMCKassTransmitter.hh
         Transmitters/LMCKassCurrentTransmitter.hh

diff --git a/Source/Core/LMCFIRFileHandler.cc b/Source/Core/LMCFIRFileHandler.cc
@@ -24,10 +24,10 @@ namespace locust
 
     bool FIRTransmitterHandler::Configure(const scarab::param_node& aParam)
     {
-	int fNModes = 2;
-	if( aParam.has( "n-modes" ) ) 
+        int fNModes = 2;
+        if( aParam.has( "n-modes" ) )
         {   
-                fNModes = aParam["n-modes"]().as_int();
+            fNModes = aParam["n-modes"]().as_int();
         }  
         if( aParam.has( "fir-transmitter-filename" ) )
         {

diff --git a/Source/Core/LMCHFSSResponseFileHandler.cc b/Source/Core/LMCHFSSResponseFileHandler.cc
@@ -175,7 +175,24 @@ namespace locust
             fftw_free(fFIRComplex);
             fFIRComplex = NULL;
         }
+
+
+        for( int bTE=0; bTE<2; bTE++)
+        {
+            for(int l=0; l<fNModes; l++)
+            {
+                for(int m=0; m<fNModes; m++)
+                {
+                    for(int n=0; n<fNModes; n++)
+                    {
+                    	fftw_free(fFilterComplexArray[bTE][l][m][n]);
+                    	fFilterComplexArray[bTE][l][m][n] = NULL;
+                    }
+                }
+            }
+        }
     }
+
     bool TFFileHandlerCore::Configure(const scarab::param_node& aParam)
     {
         return true;

diff --git a/Source/Core/LMCMPIEnvironment.hh b/Source/Core/LMCMPIEnvironment.hh
@@ -0,0 +1,25 @@
+/*
+ * MPIEnvironment.hh
+ *
+ * Includes MPI and defines common macros.
+ *
+ *  Created on: 17 Aug 2015
+ *      Author: wolfgang
+ */
+
+#ifndef KMPIENVIRONMENT_HH_
+#define KMPIENVIRONMENT_HH_
+
+#ifdef KEMFIELD_USE_MPI
+#include "KMPIInterface.hh"
+#endif
+
+#ifdef KEMFIELD_USE_MPI
+#define MPI_SINGLE_PROCESS if (KEMField::KMPIInterface::GetInstance()->GetProcess() == 0)
+#define MPI_SECOND_PROCESS if (KEMField::KMPIInterface::GetInstance()->GetProcess() == 1)
+#else
+#define MPI_SINGLE_PROCESS
+#define MPI_SECOND_PROCESS
+#endif
+
+#endif /* KMPIENVIRONMENT_HH_ */