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🚀 Add matched analyses#2

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juanesarango wants to merge 15 commits intomainpapaemmelab/nf-purple:mainfrom run-matchedpapaemmelab/nf-purple:run-matchedCopy head branch name to clipboard

+763-492

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Commits on Jan 23, 2024

• 🔧 first attempt to add conditional matched

  juanesarango

  committed
  094e68f

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• ✅ works for matched, but not unmatched

  juanesarango

  committed
  dc1d018

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Commits on Aug 14, 2024

• Merge branch 'main' into run-matched

  juanesarango

  authored
  235b4ff

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Commits on Nov 8, 2024

• 🧬 improve script to run matched TvsN setting

  juanesarango

  committed
  1e6fe20

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Commits on Nov 14, 2024

• 🔧 fix binCobalt and main workflow

  juanesarango

  committed
  14a817b

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Commits on Nov 16, 2024

• 🧬 add sage for somatic enrichment

  juanesarango

  committed
  8e7de21

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• ✅ modify test.config

  juanesarango

  committed
  e744b5a

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• ✅ modify test.config

  juanesarango

  committed
  79e94d9

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Commits on Dec 20, 2024

• 🔧 only run cobalt binning for matched

  juanesarango

  committed
  d74dc5c

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Commits on Dec 21, 2024

• ✅ add e2e tests for matched

  juanesarango

  committed
  4f7b7fe

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• ✅ config proper process containers

  juanesarango

  committed
  1d864d6

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• ✅ remove binCobalt snapshot

  juanesarango

  committed
  8ea1310

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• 🐛 fix test path

  juanesarango

  committed
  4c19cec

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• ✅ fix unit tests

  juanesarango

  committed
  ab793b9

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Commits on Dec 23, 2024

• 🔧 add test config for matched tests

  juanesarango

  committed
  d043554

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