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    93 repositories

    • website

      Public
      Nextflow public web site
      HTML
      •68•6•2•5•Updated Dec 14, 2024Dec 14, 2024

    • vscode-language-nextflow

      Public
      Nextflow language support for Visual Studio Editor
      nextflowvscode-extension
      TypeScript
      •
      MIT License
      •14•32•8•3•Updated Dec 14, 2024Dec 14, 2024

    • nextflow

      Public
      A DSL for data-driven computational pipelines
      dockergroovyhelloawscloudpipelinehpcreproducible-researchworkflow-engineslurm
      Groovy
      •
      Apache License 2.0
      •638•2.8k•422•82•Updated Dec 13, 2024Dec 13, 2024

    • language-server

      Public
      The Nextflow language server
      nextflowlanguage-server-protocol
      Java
      •
      Apache License 2.0
      •0•11•23•11•Updated Dec 13, 2024Dec 13, 2024

    • training

      Public
      Nextflow training material
      traininglearningworkshopnextflowpipelinesteachingworkflowstutorial
      Nextflow
      •
      Other
      •126•134•47•10•Updated Dec 12, 2024Dec 12, 2024

    • nf-co2footprint

      Public
      [WIP] A Nextflow plugin to estimate the CO2 footprint of pipeline runs.
      Groovy
      •
      Apache License 2.0
      •6•16•5•3•Updated Dec 12, 2024Dec 12, 2024

    • nf-nomad

      Public
      Hashicorp Nomad executor plugin for Nextflow
      Groovy
      •
      Apache License 2.0
      •4•2•6•1•Updated Dec 11, 2024Dec 11, 2024

    • plugins

      Public
      Nextflow plugins index repository
      23•1•2•1•Updated Dec 11, 2024Dec 11, 2024

    • nf-parquet

      Public
      Plugin implementing the support for Apache Parquet files (experimental)
      Groovy
      •
      Apache License 2.0
      •2•3•0•0•Updated Dec 11, 2024Dec 11, 2024

    • GPars

      Public
      The GPars concurrency and parallelism framework for the JVM
      Groovy
      •
      Other
      •58•0•0•0•Updated Dec 10, 2024Dec 10, 2024

    • nf-hello

      Public template
      Nextflow plugin implementation skeleton
      Groovy
      •
      Apache License 2.0
      •22•9•4•1•Updated Dec 9, 2024Dec 9, 2024

    • nf-schema

      Public
      Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines
      Groovy
      •
      Apache License 2.0
      •21•14•13•2•Updated Dec 3, 2024Dec 3, 2024

    • nf-wave

      Public
      Wave provisioning containers plugin for Nextflow
      2•0•5•0•Updated Dec 3, 2024Dec 3, 2024

    • nf-google

      Public
      Nextflow plugin providing the support for Google cloud
      Apache License 2.0
      •1•0•0•0•Updated Dec 3, 2024Dec 3, 2024

    • nf-azure

      Public
      Azure cloud plugin for Nextflow
      Apache License 2.0
      •1•2•0•0•Updated Dec 3, 2024Dec 3, 2024

    • nf-amazon

      Public
      Amazon Web Services plugin for Nextflow
      Apache License 2.0
      •2•1•1•0•Updated Dec 3, 2024Dec 3, 2024

    • summit-website

      Public
      Astro
      •5•2•1•1•Updated Nov 13, 2024Nov 13, 2024

    • rnaseq-nf

      Public
      A proof of concept of RNAseq pipeline
      genomicsnextflowrnaseq
      Nextflow
      •
      Apache License 2.0
      •104•74•6•3•Updated Nov 8, 2024Nov 8, 2024

    • nf-prov

      Public
      Groovy
      •
      Apache License 2.0
      •12•27•11•3•Updated Nov 5, 2024Nov 5, 2024

    • nf-sqldb

      Public
      SQL support plugin for Nextflow
      Groovy
      •
      Apache License 2.0
      •1•26•5•3•Updated Nov 5, 2024Nov 5, 2024

    • nf-tower

      Public
      Nextflow plugin providing the support for Tower
      Mozilla Public License 2.0
      •1•1•0•0•Updated Oct 27, 2024Oct 27, 2024

    • summit

      Public
      Nextflow
      •
      Apache License 2.0
      •0•3•0•0•Updated Oct 21, 2024Oct 21, 2024

    • socks

      Public
      nextflow run socks
      Nextflow
      •
      Apache License 2.0
      •0•6•0•0•Updated Oct 7, 2024Oct 7, 2024

    • vim-language-nextflow

      Public
      Vim plugin for Nextflow
      Vim Script
      •
      Apache License 2.0
      •1•0•0•0•Updated Sep 6, 2024Sep 6, 2024

    • nf-validation

      Public archive
      Params validation plugin for Nextflow pipelines
      pluginnextflowsamplesheetvalidationjson-schema
      Groovy
      •
      Apache License 2.0
      •21•48•0•0•Updated Aug 7, 2024Aug 7, 2024

    • nf-console

      Public
      Console plugin for Nextflow
      Apache License 2.0
      •1•0•1•0•Updated Aug 5, 2024Aug 5, 2024

    • nf-codecommit

      Public
      Amazon CodeCommit plugin for Nextflow
      1•0•0•0•Updated Aug 5, 2024Aug 5, 2024

    • nf-cloudcache

      Public
      Plugin implementing a cache metadata DB over cloud object storage
      Apache License 2.0
      •1•0•0•0•Updated Aug 5, 2024Aug 5, 2024

    • hello

      Public
      Classic hello world script in Nextflow language
      nextflowhello-world
      Nextflow
      •
      Apache License 2.0
      •117•16•0•5•Updated Aug 2, 2024Aug 2, 2024

    • nf-kafka

      Public
      nextflow plugin for events subsystems
      Groovy
      •
      Apache License 2.0
      •2•0•0•1•Updated Jul 10, 2024Jul 10, 2024