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    65 repositories

    • datahub

      Public
      A centralized location for storing curated data from cBioPortal
      HTML
      •120•175•125•17•Updated Nov 30, 2024Nov 30, 2024

    • oncotree

      Public
      Java
      •
      Creative Commons Attribution 4.0 International
      •27•37•29•4•Updated Nov 29, 2024Nov 29, 2024

    • cbioportal

      Public
      cBioPortal for Cancer Genomics
      visualizationscienceprecision-medicinecancer-genomics
      Java
      •
      GNU Affero General Public License v3.0
      •534•665•291•30•Updated Nov 29, 2024Nov 29, 2024

    • cbioportal-core

      Public
      Externalized cBioPortal Core
      Java
      •15•2•14•7•Updated Nov 27, 2024Nov 27, 2024

    • cbioportal-frontend

      Public
      React Frontend of cBioPortal 🎉
      reactmobxcancer-genomics
      TypeScript
      •
      GNU Affero General Public License v3.0
      •286•110•0•51•Updated Nov 26, 2024Nov 26, 2024

    • datahub-study-curation-tools

      Public
      Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.
      HTML
      •
      GNU Affero General Public License v3.0
      •14•18•3•2•Updated Nov 26, 2024Nov 26, 2024

    • cbioportal-helm

      Public
      Helm charts for cBioPortal Kubernetes Deployment
      1•0•0•0•Updated Nov 26, 2024Nov 26, 2024

    • cbioportal-test

      Public
      Tests for cBioPortal.
      Shell
      •
      MIT License
      •1•0•0•0•Updated Nov 25, 2024Nov 25, 2024

    • kc-user-importer

      Public
      Keycloak Legacy Light Client and user import scripts
      Python
      •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • cbioportal-docker-compose

      Public
      Run cBioPortal using Docker Compose
      Shell
      •34•14•0•1•Updated Nov 19, 2024Nov 19, 2024

    • GSoC

      Public
      Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects
      43•113•25•0•Updated Sep 23, 2024Sep 23, 2024

    • cbiohubpy

      Public
      Python package providing convenience functions for analyzing cBioPortal data files
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 16, 2024Sep 16, 2024

    • cbio-jupyter

      Public
      JavaScript
      •1•0•0•0•Updated Aug 23, 2024Aug 23, 2024

    • clinical-data-dictionary

      Public
      Clinical Attribute Web Service for retrieving clinical attribute names and metadata.
      Java
      •7•5•4•3•Updated Aug 2, 2024Aug 2, 2024

    • codebook

      Public
      A community shared resource of Python and R Notebooks that utilize the cBioPortal API for various analysis recipes
      Jupyter Notebook
      •13•9•2•0•Updated May 24, 2024May 24, 2024

    • rfc80-team

      Public
      repository to hold issues for the rfc80 development / deployment team
      0•0•14•0•Updated May 8, 2024May 8, 2024

    • .github

      Public
      README for cBioPortal Org Page
      1•0•0•1•Updated Mar 7, 2024Mar 7, 2024

    • maf

      Public
      Utility classes for the Mutation Annotation Format (MAF)
      Java
      •0•0•0•0•Updated Feb 7, 2024Feb 7, 2024

    • cancerhotspots

      Public
      Cancer Hotspots
      JavaScript
      •
      GNU Affero General Public License v3.0
      •9•5•4•2•Updated Feb 7, 2024Feb 7, 2024

    • MobxPromise

      Public
      Provides an observable interface for a computed promise.
      TypeScript
      •
      MIT License
      •5•3•0•1•Updated Jan 22, 2024Jan 22, 2024

    • cache_warmer

      Public
      JavaScript
      •1•0•0•0•Updated Nov 28, 2023Nov 28, 2023

    • installation-map

      Public
      cBioPortal Installation Map
      TypeScript
      •4•0•0•0•Updated Sep 14, 2023Sep 14, 2023

    • cbioportal-backend

      Public
      Java
      •
      GNU Affero General Public License v3.0
      •0•0•0•0•Updated Sep 12, 2023Sep 12, 2023

    • session-service

      Public
      Java
      •16•6•13•1•Updated Jul 14, 2023Jul 14, 2023

    • cbioportal-clickhouse-pilot

      Public
      Python
      •4•0•0•0•Updated May 10, 2023May 10, 2023

    • svg2pdf.js

      Public
      A javascript-only SVG to PDF conversion utility that runs in the browser leveraging jsPDF.
      HTML
      •
      MIT License
      •104•0•0•0•Updated Apr 26, 2023Apr 26, 2023

    • cbioportal-frontend-archive-1

      Public
      Archived version of cbioportal-frontend before rewriting history to remove large objects
      TypeScript
      •
      GNU Affero General Public License v3.0
      •1•0•0•1•Updated Apr 24, 2023Apr 24, 2023

    • gdc-et-pipeline

      Public
      GSoC : Spring-batch based system to extract and transform GDC hosted data to suitable cBioPortal file formats.
      Java
      •
      GNU Affero General Public License v3.0
      •4•0•9•4•Updated Nov 16, 2022Nov 16, 2022

    • documentation

      Public archive
      CSS
      •1•0•1•1•Updated Jun 23, 2022Jun 23, 2022

    • oncoprintjs

      Public archive
      OncoPrint visualization
      TypeScript
      •
      GNU Lesser General Public License v3.0
      •16•23•6•5•Updated Jun 8, 2022Jun 8, 2022