Repositories list

• github-classroom-template-v2

  Public template
  Jupyter Notebook

  •0•0•0•0•Updated Dec 10, 2024Dec 10, 2024

• github_classroom_test_scripts

  Public
  dedicated repo for github classroom associated pytest scripts

  Python

  •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

• Integrating-Omics-Data-in-Medical-Records

  Public
  asbcb-codeathon-2021

  Python

  •

  MIT License

  •1•0•0•0•Updated Jun 30, 2022Jun 30, 2022

• MicrobeTaxaSARS2

  Public
  asbcb-codeathon-2021

  C++

  •

  MIT License

  •3•0•1•0•Updated Jun 4, 2022Jun 4, 2022

• Uncovering-the-Nutritional-Landscape-of-Food

  Public
  sip-codeathon-2021

  Jupyter Notebook

  •

  MIT License

  •2•3•3•0•Updated Sep 13, 2021Sep 13, 2021

• Protein-antibody-interactions-in-SARS-CoV-2-Molecular-Visualization-and-Informatics

  Public
  sip-codeathon-2021

  HTML

  •

  MIT License

  •2•0•0•0•Updated Aug 26, 2021Aug 26, 2021

• NL4Cell

  Public
  sip-codeathon-2021

  Jupyter Notebook

  •

  MIT License

  •2•1•0•0•Updated Aug 13, 2021Aug 13, 2021

• Hack-the-hack-Creating-an-automated-tool-for-running-hackathons

  Public
  sip-codeathon-2021

  Python

  •

  MIT License

  •2•2•0•0•Updated Aug 12, 2021Aug 12, 2021

• ACT

  Public
  Creates a Dockerfile for a Github repository and builds a Docker image

  dockerfiledocker-containercommand-line-tool+ 3containerizationsip-codeathon-2021automation

  Python

  •

  Other

  •1•4•0•0•Updated Aug 12, 2021Aug 12, 2021

• AnnotQC

  Public
  sip-codeathon-2021

  Jupyter Notebook

  •

  MIT License

  •1•1•0•0•Updated Aug 12, 2021Aug 12, 2021

• Creating-a-data-analytics-dashboards-highlighting-minority-maternal-health-disparities

  Public
  sip-codeathon-2021

  MIT License

  •1•0•0•0•Updated Aug 12, 2021Aug 12, 2021

• Creating-Rmarkdown-courses-to-teach-bioinformatic-analysis-pipelines

  Public
  sip-codeathon-2021

  MIT License

  •2•1•0•0•Updated Aug 12, 2021Aug 12, 2021

• Mediation-analysis-for-disparity-research

  Public
  hd-codeathon-2021

  R

  •

  MIT License

  •4•5•0•0•Updated Jun 28, 2021Jun 28, 2021

• STAW-Health

  Public
  hd-codeathon-2021

  R

  •

  MIT License

  •0•0•0•0•Updated Jun 28, 2021Jun 28, 2021

• Examination-of-COVID-19-s-impact-on-maternal-health-disparities

  Public
  hd-codeathon-2021

  R

  •

  MIT License

  •2•0•0•1•Updated Jun 25, 2021Jun 25, 2021

• Mapping-Clinical-SDOH-Screening-Tools-to-ICD-10-SDOH-Z-Codes-to-create-EHR-workflows

  Public
  hd-codeathon-2021

  Python

  •

  MIT License

  •3•1•0•1•Updated Jun 25, 2021Jun 25, 2021

• Harmonizing-Data-for-Social-Determinants-of-Health

  Public
  hd-codeathon-2021

  MIT License

  •1•1•0•1•Updated Jun 24, 2021Jun 24, 2021

• Supporting-Pandemic-Recovery-Building-insights-on-vaccine-hesitancy-in-the-communities-hardest-hit

  Public
  hd-codeathon-2021

  Jupyter Notebook

  •

  MIT License

  •0•1•0•2•Updated Jun 24, 2021Jun 24, 2021

• Cancer-Health-Disparities-through-genomic-epidemiology-Lens

  Public
  hd-codeathon-2021

  R

  •

  MIT License

  •6•2•0•0•Updated Jun 24, 2021Jun 24, 2021

• A-Way-Out

  Public
  hd-codeathon-2021

  Jupyter Notebook

  •

  MIT License

  •2•3•0•1•Updated Jun 24, 2021Jun 24, 2021

• Racial-and-SES-Disparities-in-Adolescent-and-Young-Adult-Cancers

  Public
  hd-codeathon-2021

  R

  •

  MIT License

  •0•1•0•1•Updated Jun 24, 2021Jun 24, 2021

• A-culturally-humble-and-affordable-digital-platform-to-empower-at-risk-families

  Public
  hd-codeathon-2021

  Python

  •

  MIT License

  •2•1•0•5•Updated Jun 24, 2021Jun 24, 2021

• Enhancing-the-capacity-of-variant-effect-prediction-a-multidisciplinary-application

  Public
  asbcb-codeathon-2021

  Jupyter Notebook

  •

  MIT License

  •1•2•0•0•Updated Jun 6, 2021Jun 6, 2021

• Multi-Omics-Data-Integration-Principles-Key-to-Breast-Cancer-Insights

  Public
  asbcb-codeathon-2021

  MIT License

  •0•0•0•0•Updated Jun 6, 2021Jun 6, 2021

• SARS-CoV-2-sequence-analysis-tutorial-using-Galaxy

  Public
  asbcb-codeathon-2021

  MIT License

  •5•3•5•0•Updated Jun 6, 2021Jun 6, 2021

• rust-hmmer

  Public
  A simple Rust hmmer output file parser

  asbcb-codeathon-2021

  Rust

  •

  MIT License

  •1•0•0•0•Updated Jun 3, 2021Jun 3, 2021

• subject-sample-search

  Public
  cshl-codeathon-2020

  Python

  •

  MIT License

  •2•3•3•0•Updated Nov 19, 2020Nov 19, 2020

• A-FAIR-Data-Collection-Tool-to-standardize-research-meta-data-collection

  Public
  A Google sheets based tool for the collection of research data using the Investigation, Study, Assay (ISA) framework.

  google-sheetsisadata-management+ 2experimental-metadatacshl-codeathon-2020

  JavaScript

  •

  MIT License

  •2•1•5•0•Updated Nov 14, 2020Nov 14, 2020

• Creating-nontechnical-jupyter-notebooks-for-exploratory-data-analysis-and-machine-learning-modeling

  Public
  cshl-codeathon-2020

  Jupyter Notebook

  •

  MIT License

  •4•1•0•0•Updated Nov 12, 2020Nov 12, 2020

• Combining-existing-sequence-analysis-methods-with-graph-displays-for-visualization

  Public
  cshl-codeathon-2020

  JavaScript

  •

  MIT License

  •3•1•1•0•Updated Nov 10, 2020Nov 10, 2020