feat: changing to 95% file for finngen ingestion (#83)

opentargets · Nov 22, 2024 · 2f7a0ec · 2f7a0ec
1 parent af3bae1
commit 2f7a0ec
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/src/ot_orchestration/dags/config/finngen_ingestion.yaml b/src/ot_orchestration/dags/config/finngen_ingestion.yaml
@@ -30,8 +30,7 @@ nodes:
       step: finngen_finemapping_ingestion
       step.finngen_finemapping_out: gs://finngen_data/r11/credible_set_datasets/susie
       step.finngen_susie_finemapping_snp_files: gs://finngen-public-data-r11/finemap/full/susie/*.snp.bgz
-      # As directory contains SUSIE.cred.summary.tsv, SUSIE_99.cred.summary.tsv ensure only non 99 credible sets are ingested,
-      step.finngen_susie_finemapping_cs_summary_files: gs://finngen-public-data-r11/finemap/summary/*SUSIE_99.cred.summary.tsv
+      step.finngen_susie_finemapping_cs_summary_files: gs://finngen-public-data-r11/finemap/summary/*SUSIE.cred.summary.tsv
       step.finngen_finemapping_lead_pvalue_threshold: 1e-5
       step.finngen_release_prefix: FINNGEN_R11
       step.session.start_hail: true