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<full_title>Journal of Open Source Software</full_title> | ||
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<article_title>Best practices in data analysis and sharing | ||
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Network Recommendations for Prospective Multi-Center Functional Magnetic | ||
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Imaging</journal_title> | ||
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J., Ford, J. M., Mathalon, D. H., Diaz, M., O’Leary, D. S., Gadde, S., | ||
Preda, A., Lim, K. O., … Potkin, S. G. (2012). Function Biomedical | ||
Informatics Research Network Recommendations for Prospective | ||
Multi-Center Functional Magnetic Resonance Imaging Studies. Journal of | ||
Magnetic Resonance Imaging, 36(1), 39–54. | ||
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Developmental Cognitive Neuroscience, 44, 100803. | ||
https://doi.org/10.1016/j.dcn.2020.100803</unstructured_citation> | ||
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activation across different visual feedback presentations. | ||
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<unstructured_citation>Krause, F., Benjamins, C., Eck, J., | ||
Lührs, M., Hoof, R. van, & Goebel, R. (2019). Active head motion | ||
reduction in magnetic resonance imaging using tactile feedback. Human | ||
Brain Mapping, 40(14), 4026–4037. | ||
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<journal_title>NeuroImage</journal_title> | ||
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Lührs, M., Goebel, R., & Hermans, E. J. (2021). Self-regulation of | ||
stress-related large-scale brain network balance using real-time fMRI | ||
neurofeedback. NeuroImage, 243, 118527. | ||
https://doi.org/10.1016/j.neuroimage.2021.118527</unstructured_citation> | ||
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<article_title>The potential of MR-Encephalography for | ||
BCI/Neurofeedback applications with high temporal | ||
resolution</article_title> | ||
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J., Andonegui, A. B., Poser, B. A., Heinecke, A., Krause, F., Esposito, | ||
F., Sorger, B., Hennig, J., & Goebel, R. (2019). The potential of | ||
MR-Encephalography for BCI/Neurofeedback applications with high temporal | ||
resolution. NeuroImage, 194, 228–243. | ||
https://doi.org/10.1016/j.neuroimage.2019.03.046</unstructured_citation> | ||
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Luehrs, M., Goebel, R., & Hermans, E. (2021). Self-regulation of | ||
stress-related large-scale brain network balance using real-time fMRI | ||
Neurofeedback (Version 1) [Data set]. Radboud University. | ||
https://doi.org/10.34973/cwja-hc66</unstructured_citation> | ||
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<article_title>BIDScoin: A User-Friendly Application to | ||
Convert Source Data to Brain Imaging Data Structure</article_title> | ||
<author>Zwiers</author> | ||
<journal_title>Frontiers in Neuroinformatics</journal_title> | ||
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<unstructured_citation>Zwiers, M. P., Moia, S., & | ||
Oostenveld, R. (2021). BIDScoin: A User-Friendly Application to Convert | ||
Source Data to Brain Imaging Data Structure. Frontiers in | ||
Neuroinformatics, 15, 770608. | ||
https://doi.org/10.3389/fninf.2021.770608</unstructured_citation> | ||
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<article_title>The brain imaging data structure, a format | ||
for organizing and describing outputs of neuroimaging | ||
experiments</article_title> | ||
<author>Gorgolewski</author> | ||
<journal_title>Scientific Data</journal_title> | ||
<volume>3</volume> | ||
<doi>10.1038/sdata.2016.44</doi> | ||
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Calhoun, V. D., Craddock, R. C., Das, S., Duff, E. P., Flandin, G., | ||
Ghosh, S. S., Glatard, T., Halchenko, Y. O., Handwerker, D. A., Hanke, | ||
M., Keator, D., Li, X., Michael, Z., Maumet, C., Nichols, B. N., | ||
Nichols, T. E., Pellman, J., … Poldrack, R. A. (2016). The brain imaging | ||
data structure, a format for organizing and describing outputs of | ||
neuroimaging experiments. Scientific Data, 3, 160044. | ||
https://doi.org/10.1038/sdata.2016.44</unstructured_citation> | ||
</citation> | ||
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<article_title>HeuDiConv: flexible DICOM conversion into | ||
structured directory layouts</article_title> | ||
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Ghosh, S., Velasco, P., Visconti di Oleggio Castello, M., Salo, T., | ||
Wodder II, J. T., Hanke, M., Sadil, P., Gorgolewski, K. J., Ioanas, | ||
H.-I., Rorden, C., Hendrickson, T. J., Dayan, M., Houlihan, S. D., Kent, | ||
J., Strauss, T., Lee, J., To, I., … Kennedy, D. N. (2024). HeuDiConv: | ||
flexible DICOM conversion into structured directory layouts (Version | ||
v1.1.3). Zenodo. | ||
https://doi.org/10.5281/zenodo.11201247</unstructured_citation> | ||
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