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<article_title>Numerical solutions to non-linear | ||
inhomogeneous problems in superconductivity</article_title> | ||
<author>Benfenati</author> | ||
<cYear>2022</cYear> | ||
<unstructured_citation>Benfenati, A. L. (2022). Numerical | ||
solutions to non-linear inhomogeneous problems in superconductivity [PhD | ||
thesis, KTH]. | ||
https://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-311403</unstructured_citation> | ||
</citation> | ||
<citation key="covaci_cbdg_2010"> | ||
<article_title>Efficient numerical approach to inhomogeneous | ||
superconductivity: The Chebyshev–Bogoliubov–de Gennes | ||
method</article_title> | ||
<author>Covaci</author> | ||
<journal_title>Physical Review Letters</journal_title> | ||
<volume>105</volume> | ||
<doi>10.1103/PhysRevLett.105.167006</doi> | ||
<issn>0031-9007</issn> | ||
<cYear>2010</cYear> | ||
<unstructured_citation>Covaci, L., Peeters, F. M., & | ||
Berciu, M. (2010). Efficient numerical approach to inhomogeneous | ||
superconductivity: The Chebyshev–Bogoliubov–de Gennes method. Physical | ||
Review Letters, 105, 167006. | ||
https://doi.org/10.1103/PhysRevLett.105.167006</unstructured_citation> | ||
</citation> | ||
<citation key="degennes_bdg_1966"> | ||
<volume_title>Superconductivity of metals and | ||
alloys</volume_title> | ||
<author>de Gennes</author> | ||
<doi>10.1201/9780429497032</doi> | ||
<isbn>9780429497032</isbn> | ||
<cYear>1966</cYear> | ||
<unstructured_citation>de Gennes, P. G. (1966). | ||
Superconductivity of metals and alloys. | ||
https://doi.org/10.1201/9780429497032</unstructured_citation> | ||
</citation> | ||
<citation key="goedecker_fermi_1994"> | ||
<article_title>Efficient linear scaling algorithm for | ||
tight-binding molecular dynamics</article_title> | ||
<author>Goedecker</author> | ||
<journal_title>Physical Review Letters</journal_title> | ||
<volume>73</volume> | ||
<doi>10.1103/PhysRevLett.73.122</doi> | ||
<issn>0031-9007</issn> | ||
<cYear>1994</cYear> | ||
<unstructured_citation>Goedecker, S., & Colombo, L. | ||
(1994). Efficient linear scaling algorithm for tight-binding molecular | ||
dynamics. Physical Review Letters, 73, 122–125. | ||
https://doi.org/10.1103/PhysRevLett.73.122</unstructured_citation> | ||
</citation> | ||
<citation key="groth_kwant_2014"> | ||
<article_title>Kwant: A software package for quantum | ||
transport</article_title> | ||
<author>Groth</author> | ||
<journal_title>New Journal of Physics</journal_title> | ||
<volume>16</volume> | ||
<doi>10.1088/1367-2630/16/6/063065</doi> | ||
<cYear>2014</cYear> | ||
<unstructured_citation>Groth, C. W., Wimmer, M., Akhmerov, | ||
A. R., & Waintal, X. (2014). Kwant: A software package for quantum | ||
transport. New Journal of Physics, 16, 063065. | ||
https://doi.org/10.1088/1367-2630/16/6/063065</unstructured_citation> | ||
</citation> | ||
<citation key="moldovan_pybinding_2020"> | ||
<article_title>Pybinding: A python package for tight-binding | ||
calculations</article_title> | ||
<author>Moldovan</author> | ||
<journal_title>Zenodo</journal_title> | ||
<doi>10.5281/Zenodo.4010216</doi> | ||
<cYear>2020</cYear> | ||
<unstructured_citation>Moldovan, Dean, Anđelković, Miša, | ||
& Peeters, F. (2020). Pybinding: A python package for tight-binding | ||
calculations. Zenodo. | ||
https://doi.org/10.5281/Zenodo.4010216</unstructured_citation> | ||
</citation> | ||
<citation key="nagai_krylov_2020"> | ||
<article_title>N-independent localized Krylov–Bogoliubov-de | ||
Gennes method: Ultra-fast numerical approach to large-scale | ||
inhomogeneous superconductors</article_title> | ||
<author>Nagai</author> | ||
<journal_title>Journal of the Physical Society of | ||
Japan</journal_title> | ||
<volume>89</volume> | ||
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<issn>0031-9015</issn> | ||
<cYear>2020</cYear> | ||
<unstructured_citation>Nagai, Y. (2020). N-independent | ||
localized Krylov–Bogoliubov-de Gennes method: Ultra-fast numerical | ||
approach to large-scale inhomogeneous superconductors. Journal of the | ||
Physical Society of Japan, 89, 074703. | ||
https://doi.org/10.7566/JPSJ.89.074703</unstructured_citation> | ||
</citation> | ||
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<article_title>Reduced-shifted conjugate-gradient method for | ||
a Green’s function: Efficient numerical approach in a nano-structured | ||
superconductor</article_title> | ||
<author>Nagai</author> | ||
<journal_title>Journal of the Physical Society of | ||
Japan</journal_title> | ||
<volume>86</volume> | ||
<doi>10.7566/JPSJ.86.014708</doi> | ||
<issn>0031-9015</issn> | ||
<cYear>2017</cYear> | ||
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Y., & Sakurai, T. (2017). Reduced-shifted conjugate-gradient method | ||
for a Green’s function: Efficient numerical approach in a | ||
nano-structured superconductor. Journal of the Physical Society of | ||
Japan, 86, 014708. | ||
https://doi.org/10.7566/JPSJ.86.014708</unstructured_citation> | ||
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<article_title>DC Josephson effect in | ||
altermagnets</article_title> | ||
<author>Ouassou</author> | ||
<journal_title>Physical Review Letters</journal_title> | ||
<volume>131</volume> | ||
<doi>10.1103/PhysRevLett.131.076003</doi> | ||
<issn>0031-9007</issn> | ||
<cYear>2023</cYear> | ||
<unstructured_citation>Ouassou, J. A., Brataas, A., & | ||
Linder, J. (2023). DC Josephson effect in altermagnets. Physical Review | ||
Letters, 131, 076003. | ||
https://doi.org/10.1103/PhysRevLett.131.076003</unstructured_citation> | ||
</citation> | ||
<citation key="ouassou_bisect_2016"> | ||
<article_title>Electric control of superconducting | ||
transition through a spin-orbit coupled interface</article_title> | ||
<author>Ouassou</author> | ||
<journal_title>Scientific Reports</journal_title> | ||
<volume>6</volume> | ||
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<cYear>2016</cYear> | ||
<unstructured_citation>Ouassou, J. A., Bernardo, A. D., | ||
Robinson, J. W. A., & Linder, J. (2016). Electric control of | ||
superconducting transition through a spin-orbit coupled interface. | ||
Scientific Reports, 6, 29312. | ||
https://doi.org/10.1038/SRep29312</unstructured_citation> | ||
</citation> | ||
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<article_title>Dzyaloshinskii–Moriya spin–spin interaction | ||
from mixed-parity superconductivity</article_title> | ||
<author>Ouassou</author> | ||
<doi>10.48550/arXiv.2407.07144</doi> | ||
<cYear>2024</cYear> | ||
<unstructured_citation>Ouassou, J. A., Yokoyama, T., & | ||
Linder, J. (2024). Dzyaloshinskii–Moriya spin–spin interaction from | ||
mixed-parity superconductivity. | ||
https://doi.org/10.48550/arXiv.2407.07144</unstructured_citation> | ||
</citation> | ||
<citation key="ouassou_phd_2019"> | ||
<article_title>Manipulating superconductivity in magnetic | ||
nanostructures in and out of equilibrium</article_title> | ||
<author>Ouassou</author> | ||
<cYear>2019</cYear> | ||
<unstructured_citation>Ouassou, J. A. (2019). Manipulating | ||
superconductivity in magnetic nanostructures in and out of equilibrium | ||
[PhD thesis, NTNU]. | ||
https://pvv.org/~jabirali/academic/phd.pdf</unstructured_citation> | ||
</citation> | ||
<citation key="ouassou_rkky_2024"> | ||
<article_title>RKKY interaction in triplet superconductors: | ||
Dzyaloshinskii–Moriya-type interaction mediated by spin-polarized Cooper | ||
pairs</article_title> | ||
<author>Ouassou</author> | ||
<journal_title>Physical Review B</journal_title> | ||
<volume>109</volume> | ||
<doi>10.1103/PhysRevB.109.174506</doi> | ||
<issn>2469-9950</issn> | ||
<cYear>2024</cYear> | ||
<unstructured_citation>Ouassou, J. A., Yokoyama, T., & | ||
Linder, J. (2024). RKKY interaction in triplet superconductors: | ||
Dzyaloshinskii–Moriya-type interaction mediated by spin-polarized Cooper | ||
pairs. Physical Review B, 109, 174506. | ||
https://doi.org/10.1103/PhysRevB.109.174506</unstructured_citation> | ||
</citation> | ||
<citation key="scipy_2020"> | ||
<article_title>SciPy 1.0: Fundamental Algorithms for | ||
Scientific Computing in Python</article_title> | ||
<author>Virtanen</author> | ||
<journal_title>Nature Methods</journal_title> | ||
<volume>17</volume> | ||
<doi>10.1038/S41592-019-0686-2</doi> | ||
<cYear>2020</cYear> | ||
<unstructured_citation>Virtanen, P., Gommers, R., Oliphant, | ||
T. E., Haberland, M., Reddy, T., Cournapeau, D., Burovski, E., Peterson, | ||
P., Weckesser, W., Bright, J., van der Walt, S. J., Brett, M., Wilson, | ||
J., Millman, K. J., Mayorov, N., Nelson, A. R. J., Jones, E., Kern, R., | ||
Larson, E., … SciPy 1.0 Contributors. (2020). SciPy 1.0: Fundamental | ||
Algorithms for Scientific Computing in Python. Nature Methods, 17, | ||
261–272. | ||
https://doi.org/10.1038/S41592-019-0686-2</unstructured_citation> | ||
</citation> | ||
<citation key="weisse_chebyshev_2006"> | ||
<article_title>The kernel polynomial method</article_title> | ||
<author>Weiße</author> | ||
<journal_title>Reviews of Modern Physics</journal_title> | ||
<volume>78</volume> | ||
<doi>10.1103/RevModPhys.78.275</doi> | ||
<cYear>2006</cYear> | ||
<unstructured_citation>Weiße, A., Wellein, G., Alvermann, | ||
A., & Fehske, H. (2006). The kernel polynomial method. Reviews of | ||
Modern Physics, 78, 275–306. | ||
https://doi.org/10.1103/RevModPhys.78.275</unstructured_citation> | ||
</citation> | ||
<citation key="zhu_bdg_2016"> | ||
<volume_title>Bogoliubov–de Gennes method and its | ||
applications</volume_title> | ||
<author>Zhu</author> | ||
<doi>10.1007/978-3-319-31314-6</doi> | ||
<isbn>9783319313122</isbn> | ||
<cYear>2016</cYear> | ||
<unstructured_citation>Zhu, J.-X. (2016). Bogoliubov–de | ||
Gennes method and its applications. | ||
https://doi.org/10.1007/978-3-319-31314-6</unstructured_citation> | ||
</citation> | ||
</citation_list> | ||
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