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Castillo, J. (2021). Mimetic finite difference methods for restoration | ||
of fundus images for automatic detection of glaucoma suspects. Computer | ||
Methods in Biomechanics and Biomedical Engineering: Imaging & | ||
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Hanzich, M., Castillo, J. E., & Cela, J. M. (2014). Mimetic seismic | ||
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divergence and gradients satisfying a global conservation law. Matrix | ||
Analysis and Applications, 25. | ||
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Journal of Open Source Software, 1. | ||
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Mathematics</journal_title> | ||
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api for mimetic finite differences. Journal of Computational and Applied | ||
Mathematics, 270, 308–322. | ||
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processing</article_title> | ||
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Mathematics</journal_title> | ||
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processing. Computational & Applied Mathematics, 30(3), 701–720. | ||
https://doi.org/10.1590/S1807-03022011000300012</unstructured_citation> | ||
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<article_title>High-order mimetic finite differences for | ||
anisotropic elliptic equations</article_title> | ||
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<volume>213</volume> | ||
<doi>10.1016/j.compfluid.2020.104746</doi> | ||
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Castillo, J. E. (2020). High-order mimetic finite differences for | ||
anisotropic elliptic equations. Computers & Fluids, 213, 104746. | ||
https://doi.org/10.1016/j.compfluid.2020.104746</unstructured_citation> | ||
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unsaturated flow using Richards equation</article_title> | ||
<author>Velazco</author> | ||
<journal_title>Mathematics in Applied Sciences and | ||
Engineering</journal_title> | ||
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<doi>10.5206/mase/10874</doi> | ||
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Castillo, J. (2020). High order mimetic difference simulation of | ||
unsaturated flow using Richards equation. Mathematics in Applied | ||
Sciences and Engineering, 1(4), 401–409. | ||
https://doi.org/10.5206/mase/10874</unstructured_citation> | ||
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operators</article_title> | ||
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<journal_title>Computers & Fluids</journal_title> | ||
<volume>254</volume> | ||
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Fluids, 254, 105817. | ||
https://doi.org/10.1016/j.compfluid.2023.105817</unstructured_citation> | ||
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grids</article_title> | ||
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(2022). Interpolation operators for staggered grids (No. CSRC2022-02). | ||
San Diego State University Computational Science Research Center. | ||
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(2022). Energy conservation of second-order mimetic difference schemes | ||
for the 1D advection equation (No. CSRC2022-03). San Diego State | ||
University Computational Science Research Center. | ||
https://doi.org/10.13140/RG.2.2.19919.25767</unstructured_citation> | ||
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(2023). Mimetic analogs of vector calculus identities (CSRC2023-01, | ||
submitted for publication). San Diego State University Computational | ||
Science Research Center. | ||
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(2023). Energy conservation and convergence of high-order mimetic | ||
schemes for the 3D advection equation (CSRC2023-05, submitted for | ||
publication). San Diego State University Computational Science Research | ||
Center. | ||
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