Code

Setting up nipype-auto-converter#5

Code

Merged

tclose merged 48 commits intomainnipype/pydra-mriqc:mainfrom nipype-auto-convnipype/pydra-mriqc:nipype-auto-convCopy head branch name to clipboardMay 22, 2024

+3,458-4,806

Commits

Commits on Mar 3, 2024

• added __all__ attribute to init

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  260d83e

Commits on Mar 19, 2024

• updated actions versions

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Commits on Apr 16, 2024

• refreshed generated package

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  40d08d3

Commits on Apr 17, 2024

• autoformat

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  67de781

Commits on Apr 18, 2024

• touched up conversion specs

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  71d1c1e

• updates to package and prproject yamls

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Commits on Apr 21, 2024

• editing conversion specs to get package to build

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Commits on Apr 22, 2024

• touched up package spec

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Commits on Apr 23, 2024

• omitted and find-replaces several things to get tests to run

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Commits on Apr 24, 2024

• debugging workflow tests

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Commits on Apr 25, 2024

• debugging workflow conversions

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• debugging compute iqms

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Commits on Apr 26, 2024

• cleaned up some different workflow-specific issues using find/replace

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• removed unnecessary omp_nthreads default

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• added test_inputs to synthstrip

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Commits on Apr 30, 2024

• refactoring workflow input/output specifications

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• deleted unused fmri brain mask workflow fmri_bmsk_workflow

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Commits on May 3, 2024

• Modifying syntax of how inputs/outputs are specified

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Commits on May 15, 2024

• debugging conversion

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• removed early return if not verbose so all outputs are generated by anat report workflow

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• got diffusion workflow to build successfully

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• added metadata input

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Commits on May 16, 2024

• all workflows build!!

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Commits on May 17, 2024

• Merge branch 'main' into nipype-auto-conv

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• added pydra task dependencies

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• removed fileformats from ci-cd

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• added job dependency in gha

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• added nipy to nipype2pydra deps

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Commits on May 18, 2024

• touched up ci-cd workflow

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• removed files that shouldn't have been included in vcs

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• updated requirements file

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• added nirodents to conv reqs

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Commits on May 20, 2024

• removed installation of toolkit deps from ci-cd (will mock instead)

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  25b5743

• added mock tools

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  ca0dfbd

• debugging ci-cd

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• debugging ci-cd

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• updated release checking in ci-cd

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  bb6557d

• added in depedencies required to run

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Commits on May 21, 2024

• debugging ci-cd

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  2149296

• added package init

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  22d475f

• find replace >py3.8 syntax to 3.8 syntax

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• removed support for Python 3.8

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• python versions

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• added pydra-nireports

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• install dev version of pydra for testing

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Commits on May 22, 2024

• fixed branch of pydra install in ci-cd

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• debugging ci-cd

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  6fac852

• updated environment variables in ci-cd

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