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Deploying to demo from @ fbacdca 🚀
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@neurolabusc
neurolabusc committed Apr 28, 2024
1 parent 25e6626 commit fee0208
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338 changes: 169 additions & 169 deletions assets/index-mU6FTJQb.js → assets/index-C2IJCTcd.js
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2 changes: 1 addition & 1 deletion index.html
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<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<link rel="stylesheet" href="./niivue.css" />
<title>Niivue brain chop</title>
<script type="module" crossorigin src="./assets/index-mU6FTJQb.js"></script>
<script type="module" crossorigin src="./assets/index-C2IJCTcd.js"></script>
</head>

<body>
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6 changes: 6 additions & 0 deletions models/model18cls/colormap.json
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{
"R": [ 0, 245, 205, 120, 196, 220, 230, 0, 122, 236, 12, 204, 42, 119, 220, 103, 255, 165],
"G": [ 0, 245, 62, 18, 58, 248, 148, 118, 186, 13, 48, 182, 204, 159, 216, 255, 165, 42],
"B": [ 0, 245, 78, 134, 250, 164, 34, 14, 220, 176, 255, 142, 164, 176, 20, 255, 0, 42],
"labels": [ "Unknown", "Cerebral-White-Matter", "Cerebral-Cortex", "Lateral-Ventricle", "Inferior-Lateral-Ventricle", "Cerebellum-White-Matter", "Cerebellum-Cortex", "Thalamus", "Caudate", "Putamen", "Pallidum", "3rd-Ventricle", "4th-Ventricle", "Brain-Stem", "Hippocampus", "Amygdala", "Accumbens-area", "VentralDC"]
}
6 changes: 6 additions & 0 deletions models/model20chan3cls/colormap.json
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{
"R": [ 0, 255, 205],
"G": [ 0, 255, 62],
"B": [ 0, 255, 78],
"labels": [ "background", "White Matter", "Grey Matter"]
}
6 changes: 6 additions & 0 deletions models/model21_104class/colormap.json
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{
"R": [ 0, 25, 125, 100, 220, 220, 180, 220, 180, 140, 20, 35, 225, 200, 160, 20, 60, 220, 20, 220, 120, 220, 220, 60, 160, 80, 75, 20, 20, 140, 80, 100, 70, 150, 255, 25, 125, 100, 220, 220, 180, 220, 180, 140, 20, 35, 225, 200, 160, 20, 60, 220, 20, 220, 120, 220, 220, 60, 160, 80, 75, 20, 20, 140, 80, 100, 70, 150, 255, 0, 0, 122, 122, 236, 236, 12, 13, 220, 220, 103, 103, 255, 255, 165, 165, 245, 245, 120, 196, 120, 196, 204, 42, 60, 119, 220, 220, 230, 230, 0, 0, 0, 0, 0],
"G": [ 0, 100, 100, 25, 20, 20, 220, 60, 40, 20, 30, 75, 140, 35, 100, 220, 220, 180, 100, 60, 100, 20, 180, 20, 140, 20, 50, 220, 180, 220, 160, 0, 70, 150, 192, 100, 100, 25, 20, 20, 220, 60, 40, 20, 30, 75, 140, 35, 100, 220, 220, 180, 100, 60, 100, 20, 180, 20, 140, 20, 50, 220, 180, 220, 160, 0, 70, 150, 192, 118, 118, 186, 186, 13, 13, 48, 48, 216, 216, 255, 255, 165, 165, 42, 42, 245, 245, 18, 58, 18, 58, 182, 204, 60, 159, 248, 248, 148, 148, 0, 0, 0, 0, 0],
"B": [ 0, 40, 160, 0, 100, 10, 140, 220, 120, 140, 140, 50, 140, 75, 50, 60, 60, 140, 50, 20, 60, 20, 220, 220, 180, 140, 125, 160, 140, 220, 20, 100, 70, 200, 32, 40, 160, 0, 100, 10, 140, 220, 120, 140, 140, 50, 140, 75, 50, 60, 60, 140, 50, 20, 60, 20, 220, 220, 180, 140, 125, 160, 140, 220, 20, 100, 70, 200, 32, 14, 14, 220, 220, 176, 176, 255, 255, 20, 20, 255, 255, 0, 0, 42, 42, 245, 245, 134, 250, 134, 250, 142, 164, 60, 176, 164, 164, 34, 34, 64, 112, 160, 208, 255],
"labels": [ "BG", "ctx-lh-bankssts", "ctx-lh-caudalanteriorcingulate", "ctx-lh-caudalmiddlefrontal", "ctx-lh-cuneus", "ctx-lh-entorhinal", "ctx-lh-fusiform", "ctx-lh-inferiorparietal", "ctx-lh-inferiortemporal", "ctx-lh-isthmuscingulate", "ctx-lh-lateraloccipital", "ctx-lh-lateralorbitofrontal", "ctx-lh-lingual", "ctx-lh-medialorbitofrontal", "ctx-lh-middletemporal", "ctx-lh-parahippocampal", "ctx-lh-paracentral", "ctx-lh-parsopercularis", "ctx-lh-parsorbitalis", "ctx-lh-parstriangularis", "ctx-lh-pericalcarine", "ctx-lh-postcentral", "ctx-lh-posteriorcingulate", "ctx-lh-precentral", "ctx-lh-precuneus", "ctx-lh-rostralanteriorcingulate", "ctx-lh-rostralmiddlefrontal", "ctx-lh-superiorfrontal", "ctx-lh-superiorparietal", "ctx-lh-superiortemporal", "ctx-lh-supramarginal", "ctx-lh-frontalpole", "ctx-lh-temporalpole", "ctx-lh-transversetemporal", "ctx-lh-insula", "ctx-rh-bankssts", "ctx-rh-caudalanteriorcingulate", "ctx-rh-caudalmiddlefrontal", "ctx-rh-cuneus", "ctx-rh-entorhinal", "ctx-rh-fusiform", "ctx-rh-inferiorparietal", "ctx-rh-inferiortemporal", "ctx-rh-isthmuscingulate", "ctx-rh-lateraloccipital", "ctx-rh-lateralorbitofrontal", "ctx-rh-lingual", "ctx-rh-medialorbitofrontal", "ctx-rh-middletemporal", "ctx-rh-parahippocampal", "ctx-rh-paracentral", "ctx-rh-parsopercularis", "ctx-rh-parsorbitalis", "ctx-rh-parstriangularis", "ctx-rh-pericalcarine", "ctx-rh-postcentral", "ctx-rh-posteriorcingulate", "ctx-rh-precentral", "ctx-rh-precuneus", "ctx-rh-rostralanteriorcingulate", "ctx-rh-rostralmiddlefrontal", "ctx-rh-superiorfrontal", "ctx-rh-superiorparietal", "ctx-rh-superiortemporal", "ctx-rh-supramarginal", "ctx-rh-frontalpole", "ctx-rh-temporalpole", "ctx-rh-transversetemporal", "ctx-rh-insula", "Left-Thalamus-Proper*", "Right-Thalamus-Proper*", "Left-Caudate", "Right-Caudate", "Left-Putamen", "Right-Putamen", "Left-Pallidum", "Right-Pallidum", "Left-Hippocampus", "Right-Hippocampus", "Left-Amygdala", "Right-Amygdala", "Left-Accumbens-area", "Right-Accumbens-area", "Left-VentralDC", "Right-VentralDC", "Left-Cerebral-White-Matter", "Right-Cerebral-White-Matter", "Left-Lateral-Ventricle", "Left-Inf-Lat-Vent", "Right-Lateral-Ventricle", "Right-Inf-Lat-Vent", "3rd-Ventricle", "4th-Ventricle", "CSF", "Brain-Stem", "Left-Cerebellum-White-Matter", "Right-Cerebellum-White-Matter", "Left-Cerebellum-Cortex", "Right-Cerebellum-Cortex", "CC_Posterior", "CC_Mid_Posterior", "CC_Central", "CC_Mid_Anterior", "CC_Anterior"]
}
6 changes: 6 additions & 0 deletions models/model30chan18cls/colormap.json
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{
"R": [ 0, 245, 205, 120, 196, 220, 230, 0, 122, 236, 12, 204, 42, 119, 220, 103, 255, 165],
"G": [ 0, 245, 62, 18, 58, 248, 148, 118, 186, 13, 48, 182, 204, 159, 216, 255, 165, 42],
"B": [ 0, 245, 78, 134, 250, 164, 34, 14, 220, 176, 255, 142, 164, 176, 20, 255, 0, 42],
"labels": [ "Unknown", "Cerebral-White-Matter", "Cerebral-Cortex", "Lateral-Ventricle", "Inferior-Lateral-Ventricle", "Cerebellum-White-Matter", "Cerebellum-Cortex", "Thalamus", "Caudate", "Putamen", "Pallidum", "3rd-Ventricle", "4th-Ventricle", "Brain-Stem", "Hippocampus", "Amygdala", "Accumbens-area", "VentralDC"]
}
6 changes: 6 additions & 0 deletions models/model30chan50cls/colormap.json
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{
"R": [ 0, 245, 196, 220, 230, 0, 122, 236, 12, 119, 220, 103, 60, 255, 165, 0, 25, 125, 100, 220, 220, 180, 220, 180, 140, 20, 35, 225, 200, 160, 20, 60, 220, 20, 220, 120, 220, 220, 60, 160, 80, 75, 20, 20, 140, 80, 100, 70, 150, 255],
"G": [ 0, 245, 58, 248, 148, 118, 186, 13, 48, 159, 216, 255, 60, 165, 42, 0, 100, 100, 25, 20, 20, 220, 60, 40, 20, 30, 75, 140, 35, 100, 220, 220, 180, 100, 60, 100, 20, 180, 20, 140, 20, 50, 220, 180, 220, 160, 0, 70, 150, 192],
"B": [ 0, 245, 250, 164, 34, 14, 220, 176, 255, 176, 20, 255, 60, 0, 42, 208, 40, 160, 0, 100, 10, 140, 220, 120, 140, 140, 50, 140, 75, 50, 60, 60, 140, 50, 20, 60, 20, 220, 220, 180, 140, 125, 160, 140, 220, 20, 100, 70, 200, 32],
"labels": [ "BG", "Cerebral-White-Matter", "Ventricle", "Cerebellum-White-Matter", "Cerebellum", "Thalamus-Proper*", "Caudate", "Putamen", "Pallidum", "Brain-Stem", "Hippocampus", "Amygdala", "CSF", "Accumbens-area", "VentralDC", "CC_Posterior / CC_Mid_Posterior / CC_Central / CC_Mid_Anterior / CC_Anterior", "ctx-bankssts", "ctx-caudalanteriorcingulate", "ctx-caudalmiddlefrontal", "ctx-cuneus", "ctx-entorhinal", "ctx-fusiform", "ctx-inferiorparietal", "ctx-inferiortemporal", "ctx-isthmuscingulate", "ctx-lateraloccipital", "ctx-lateralorbitofrontal", "ctx-lingual", "ctx-medialorbitofrontal", "ctx-middletemporal", "ctx-parahippocampal", "ctx-paracentral", "ctx-parsopercularis", "ctx-parsorbitalis", "ctx-parstriangularis", "ctx-pericalcarine", "ctx-postcentral", "ctx-posteriorcingulate", "ctx-precentral", "ctx-precuneus", "ctx-rostralanteriorcingulate", "ctx-rostralmiddlefrontal", "ctx-superiorfrontal", "ctx-superiorparietal", "ctx-superiortemporal", "ctx-supramarginal", "ctx-frontalpole", "ctx-temporalpole", "ctx-transversetemporal", "ctx-insula"]
}
6 changes: 6 additions & 0 deletions models/model5_gw_ae/colormap.json
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{
"R": [0, 255],
"G": [0, 0],
"B": [0, 0],
"labels": ["background", "brain"]
}
6 changes: 6 additions & 0 deletions models/model5_gw_ae/colormap3.json
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{
"R": [ 0, 255, 205],
"G": [ 0, 255, 62],
"B": [ 0, 255, 78],
"labels": [ "background", "White Matter", "Grey Matter"]
}

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