add transcranial doppler ultrasonography as an assay (#541)

* add transcranial doppler ultrasonography as an assay * Rebuild NF.jsonld, json * Casing * Rebuild NF.jsonld, json --------- Co-authored-by: nf-osi[bot] <[email protected]> Co-authored-by: Anh Nguyet Vu <[email protected]>
nf-osi · Nov 14, 2024 · eb4cc25 · eb4cc25
1 parent b67754a
commit eb4cc25
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diff --git a/NF.jsonld b/NF.jsonld
@@ -27888,6 +27888,9 @@
                 {
                     "@id": "bts:Tractionforcemicroscopy"
                 },
+                {
+                    "@id": "bts:Transcranialdopplerultrasonography"
+                },
                 {
                     "@id": "bts:Twinspotassay"
                 },
@@ -31380,6 +31383,26 @@
             "sms:required": "sms:false",
             "sms:validationRules": []
         },
+        {
+            "@id": "bts:Transcranialdopplerultrasonography",
+            "@type": "rdfs:Class",
+            "rdfs:comment": "TBD",
+            "rdfs:label": "Transcranialdopplerultrasonography",
+            "rdfs:subClassOf": [
+                {
+                    "@id": "bts:ProtocolAssay"
+                },
+                {
+                    "@id": "bts:Assay"
+                }
+            ],
+            "schema:isPartOf": {
+                "@id": "http://schema.biothings.io"
+            },
+            "sms:displayName": "transcranial doppler ultrasonography",
+            "sms:required": "sms:false",
+            "sms:validationRules": []
+        },
         {
             "@id": "bts:Twinspotassay",
             "@type": "rdfs:Class",
@@ -32122,6 +32145,9 @@
                 {
                     "@id": "bts:Tractionforcemicroscopy"
                 },
+                {
+                    "@id": "bts:Transcranialdopplerultrasonography"
+                },
                 {
                     "@id": "bts:Twinspotassay"
                 },

diff --git a/modules/Assay/Assay.yaml b/modules/Assay/Assay.yaml
@@ -581,6 +581,9 @@ enums:
       traction force microscopy:
         description: An experimental method for determining the tractions on the surface of a biological cell by obtaining measurements of the surrounding displacement field within an in vitro extracellular matrix (ECM)
         meaning: https://en.wikipedia.org/wiki/Traction_force_microscopy
+      transcranial doppler ultrasonography:
+        description: A diagnostic technique that uses pulsed Doppler ultrasound to measure the velocity of blood flow through the major blood vessels of the brain.
+        meaning: http://purl.obolibrary.org/obo/NCIT_C122930
       twin spot assay:
         description: Two individual and genetically different populations of cells that originate from the same mitotic recombination event; twin spots allow a direct and reliable comparison between mutant and wild-type clones, and the size of the wild-type twin can serve as a reference for comparison with the homozygous mutant clones.
         meaning: https://pubmed.ncbi.nlm.nih.gov/29378809/

diff --git a/registered-json-schemas/PortalDataset.json b/registered-json-schemas/PortalDataset.json
@@ -195,6 +195,7 @@
           "survival",
           "targeted exome sequencing",
           "traction force microscopy",
+          "transcranial doppler ultrasonography",
           "twin spot assay",
           "ultra high-performance liquid chromatography/tandem mass spectrometry",
           "western blot",

diff --git a/registered-json-schemas/Superdataset.json b/registered-json-schemas/Superdataset.json
@@ -195,6 +195,7 @@
           "survival",
           "targeted exome sequencing",
           "traction force microscopy",
+          "transcranial doppler ultrasonography",
           "twin spot assay",
           "ultra high-performance liquid chromatography/tandem mass spectrometry",
           "western blot",