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[Metagenomics Illumina] explicitly setting humann3 reference db locations in rule #62

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AstrobioMike opened this issue Feb 29, 2024 · 0 comments

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@AstrobioMike
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  • an issue can arise if the user is pointing to previously installed humann3 reference databases, or if the locations were manually changed for testing at some point
  • this linked commit on the metagenomics branch integrated always explicitly setting the locations based on what is in the config.yaml: 1405949
  • changes are in the humann3_PE and humann3_SE rules
  • in case it's helpful, i'm also attaching a modified Snakefile that has the changes in it (as a zip due to file-type restrictions)
    Snakefile.zip
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