This repository has been archived by the owner on Jan 13, 2022. It is now read-only.
tmassingham-ont
released this
01 Oct 12:15
·
458 commits
to master
since this release
v5.0.0
*Upgrade to Pytorch version 1.2
- Improved training stability: gradient capping and warm-up
- Merged mod-base and canonical entry points
- Custom model definitions should now take an
alphabet_info
argument rather thanoutsize
- Custom model definitions should now take an
- Improved RNA support: tools can reverse references and basecalls
- Basecaller changes:
- chunk size argument now matches guppy
- CPU calling enabled
- lower memory usage
- Multi-GPU training enabled
- Bug fixes